STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NRG1_0Transcriptional regulator NRG1. (270 aa)    
Predicted Functional Partners:
NIA1
Nitrate reductase [NADH] 1.
    
 0.772
sfc4
Transcription factor tau subunit sfc4.
    
 0.687
TONSL
Tonsoku-like protein.
    
 0.684
mit1
Chromatin remodeling factor mit1.
   
 0.646
ruvbl1
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
  0.641
A0J61_01323
Uncharacterized protein.
   
  0.614
LAMTOR2
Ragulator complex protein LAMTOR2.
    
 0.611
A0J61_08851
Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.
    
  0.608
rpsK
30S ribosomal protein S11.
    
  0.608
mrp4
37S ribosomal protein mrp4, mitochondrial.
   
  0.608
Your Current Organism:
Choanephora cucurbitarum
NCBI taxonomy Id: 101091
Other names: C. cucurbitarum, Choanephora infundibulifera f. cucurbitarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.