STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mfsd1Major facilitator superfamily domain-containing protein 1. (518 aa)    
Predicted Functional Partners:
CYB2
Cytochrome b2, mitochondrial; Belongs to the cytochrome b5 family.
   
 0.554
DYR_0
Dihydrofolate reductase; Belongs to the dihydrofolate reductase family.
    
 0.526
A0J61_11973
Uncharacterized protein.
    
 0.517
GPD2_1
Glyceraldehyde-3-phosphate dehydrogenase 2; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
    
 0.517
G3P
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.517
GPD1_1
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.517
GPD2_2
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.517
HHT1
Histone H3; Belongs to the histone H3 family.
    
 0.511
H3.1
Histone H3; Belongs to the histone H3 family.
    
 0.511
ipgm-1
2,3-bisphosphoglycerate-independent phosphoglycerate mutase.
    
  0.494
Your Current Organism:
Choanephora cucurbitarum
NCBI taxonomy Id: 101091
Other names: C. cucurbitarum, Choanephora infundibulifera f. cucurbitarum
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