STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0J61_00983Uncharacterized protein. (588 aa)    
Predicted Functional Partners:
A0J61_03299
Pheromone-regulated membrane protein 10.
  
  
0.594
dhdh
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase.
   
 
 0.469
nuo20.9
NADH-ubiquinone oxidoreductase 20 subunit.
    
   0.420
mrpl10
54S ribosomal protein L10, mitochondrial.
   
   0.420
rplS
50S ribosomal protein L19.
    
   0.418
mrp4
37S ribosomal protein mrp4, mitochondrial.
    
   0.414
rplD
50S ribosomal protein L4.
    
   0.412
mrpl32
Putative 54S ribosomal protein L32, mitochondrial.
    
   0.412
mrps5
Putative 37S ribosomal protein S5, mitochondrial.
    
   0.412
mrpl16_1
54S ribosomal protein L16, mitochondrial; Belongs to the universal ribosomal protein uL16 family.
    
   0.412
Your Current Organism:
Choanephora cucurbitarum
NCBI taxonomy Id: 101091
Other names: C. cucurbitarum, Choanephora infundibulifera f. cucurbitarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.