STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0J61_00925ABC1 family protein C10F6.14c. (543 aa)    
Predicted Functional Partners:
ubiG
Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.
   
 0.758
DCTN3
Dynactin subunit 3.
   
 0.758
ALI1
Putative NADH-ubiquinone oxidoreductase 30 subunit, mitochondrial; Belongs to the complex I 30 kDa subunit family.
    
 0.639
HEM2
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
    
 0.620
nuo-24
NADH-ubiquinone oxidoreductase subunit, mitochondrial.
    
 0.613
nuo21.3c
NADH-ubiquinone oxidoreductase subunit, mitochondrial.
    
  0.592
Coq9
Ubiquinone biosynthesis protein; Lipid-binding protein involved in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration.
  
 
 0.525
A0J61_11055
Glyco_transf_5 domain-containing protein.
   
 
  0.502
gsy-1_0
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
   
 
  0.502
gsy-1_1
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
   
 
  0.502
Your Current Organism:
Choanephora cucurbitarum
NCBI taxonomy Id: 101091
Other names: C. cucurbitarum, Choanephora infundibulifera f. cucurbitarum
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