Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0J61_10237 | EBP1 | A0A1C7MY18 | A0A1C7NKY7 | Uncharacterized protein. | ErbB-3 binding protein 1. | 0.919 |
A0J61_10237 | ERB1 | A0A1C7MY18 | A0A1C7MZM6 | Uncharacterized protein. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.519 |
A0J61_10237 | NMD3 | A0A1C7MY18 | A0A1C7NCI6 | Uncharacterized protein. | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | 0.986 |
A0J61_10237 | NOP7 | A0A1C7MY18 | A0A1C7NER0 | Uncharacterized protein. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.563 |
A0J61_10237 | SDAD1 | A0A1C7MY18 | A0A1C7ND09 | Uncharacterized protein. | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | 0.440 |
A0J61_10237 | SPB1 | A0A1C7MY18 | A0A1C7NRR8 | Uncharacterized protein. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.480 |
A0J61_10237 | ebp2_1 | A0A1C7MY18 | A0A1C7NL29 | Uncharacterized protein. | Putative rRNA-processing protein ebp2. | 0.592 |
A0J61_10237 | lsg1 | A0A1C7MY18 | A0A1C7NQL7 | Uncharacterized protein. | Large subunit GTPase 1. | 0.982 |
A0J61_10237 | nog1 | A0A1C7MY18 | A0A1C7NES5 | Uncharacterized protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.822 |
A0J61_10237 | tif6 | A0A1C7MY18 | A0A1C7N558 | Uncharacterized protein. | Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. | 0.979 |
EBP1 | A0J61_10237 | A0A1C7NKY7 | A0A1C7MY18 | ErbB-3 binding protein 1. | Uncharacterized protein. | 0.919 |
EBP1 | ERB1 | A0A1C7NKY7 | A0A1C7MZM6 | ErbB-3 binding protein 1. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.862 |
EBP1 | NMD3 | A0A1C7NKY7 | A0A1C7NCI6 | ErbB-3 binding protein 1. | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | 0.973 |
EBP1 | NOP7 | A0A1C7NKY7 | A0A1C7NER0 | ErbB-3 binding protein 1. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.973 |
EBP1 | SDAD1 | A0A1C7NKY7 | A0A1C7ND09 | ErbB-3 binding protein 1. | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | 0.943 |
EBP1 | SPB1 | A0A1C7NKY7 | A0A1C7NRR8 | ErbB-3 binding protein 1. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.832 |
EBP1 | ebp2_1 | A0A1C7NKY7 | A0A1C7NL29 | ErbB-3 binding protein 1. | Putative rRNA-processing protein ebp2. | 0.700 |
EBP1 | lsg1 | A0A1C7NKY7 | A0A1C7NQL7 | ErbB-3 binding protein 1. | Large subunit GTPase 1. | 0.949 |
EBP1 | nog1 | A0A1C7NKY7 | A0A1C7NES5 | ErbB-3 binding protein 1. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.978 |
EBP1 | tif6 | A0A1C7NKY7 | A0A1C7N558 | ErbB-3 binding protein 1. | Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. | 0.939 |
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