STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MON1AVacuolar fusion protein MON1 A. (445 aa)    
Predicted Functional Partners:
Ccz1
Vacuolar fusion protein CCZ1.
    
 0.999
VPS41
Vacuolar protein sorting-associated protein 41; Required for vacuolar assembly and vacuolar traffic. Belongs to the VPS41 family.
    
 
 0.980
RAB7_1
Ras-related protein Rab7.
    
 0.968
17E5.300_1
Putative Ras-related protein Rab7.
    
 0.938
17E5.300_0
Putative Ras-related protein Rab7.
    
 0.938
nca2
Nuclear control of ATPase protein 2.
    
 0.852
rab8A
Ras-related protein Rab-8A.
    
 0.852
A0J61_00947
Uncharacterized protein.
    
 0.834
VPS39
Vam6/Vps39-like protein.
   
 
 0.767
vps11
E3 ubiquitin-protein ligase PEP5.
    
 
 0.762
Your Current Organism:
Choanephora cucurbitarum
NCBI taxonomy Id: 101091
Other names: C. cucurbitarum, Choanephora infundibulifera f. cucurbitarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.