STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mam4Protein-S-isoprenylcysteine O-methyltransferase. (195 aa)    
Predicted Functional Partners:
Sras
CAAX prenyl protease 2.
   
 0.863
FACE1
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
    
 0.858
NUDT12
Peroxisomal NADH pyrophosphatase NUDT12.
   
 0.825
tum1
Putative 3-mercaptopyruvate sulfurtransferase.
    
  0.754
oma1
Mitochondrial metalloendopeptidase OMA1.
    
 0.698
Oma1
Metalloendopeptidase OMA1, mitochondrial.
    
 0.698
STR17
Rhodanese-like domain-containing protein 17.
    
 0.674
A0J61_04212
Putative thiosulfate sulfurtransferase, mitochondrial.
    
 0.674
fmn1_0
Riboflavin kinase.
     
 0.664
fmn1_1
Riboflavin kinase.
     
 0.664
Your Current Organism:
Choanephora cucurbitarum
NCBI taxonomy Id: 101091
Other names: C. cucurbitarum, Choanephora infundibulifera f. cucurbitarum
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