Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATG1 | CDK3 | A0A1C7N2F9 | A0A1C7N845 | Serine/threonine-protein kinase ATG1; Belongs to the protein kinase superfamily. | Cyclin-dependent kinase 3; Belongs to the protein kinase superfamily. | 0.773 |
ATG1 | PHO85 | A0A1C7N2F9 | A0A1C7NR53 | Serine/threonine-protein kinase ATG1; Belongs to the protein kinase superfamily. | Negative regulator of the PHO system; Belongs to the protein kinase superfamily. | 0.765 |
ATG1 | pas1_3 | A0A1C7N2F9 | A0A1C7NRR9 | Serine/threonine-protein kinase ATG1; Belongs to the protein kinase superfamily. | G1/S-specific cyclin pas1. | 0.590 |
CDK3 | ATG1 | A0A1C7N845 | A0A1C7N2F9 | Cyclin-dependent kinase 3; Belongs to the protein kinase superfamily. | Serine/threonine-protein kinase ATG1; Belongs to the protein kinase superfamily. | 0.773 |
CDK3 | GDE1 | A0A1C7N845 | A0A1C7NPF3 | Cyclin-dependent kinase 3; Belongs to the protein kinase superfamily. | Glycerophosphodiester phosphodiesterase GDE1. | 0.981 |
CDK3 | ku70 | A0A1C7N845 | A0A1C7N9Z5 | Cyclin-dependent kinase 3; Belongs to the protein kinase superfamily. | ATP-dependent DNA helicase II subunit 1. | 0.606 |
CDK3 | nuc-2 | A0A1C7N845 | A0A1C7NCS9 | Cyclin-dependent kinase 3; Belongs to the protein kinase superfamily. | Ankyrin repeat protein nuc-2. | 0.998 |
CDK3 | pas1_3 | A0A1C7N845 | A0A1C7NRR9 | Cyclin-dependent kinase 3; Belongs to the protein kinase superfamily. | G1/S-specific cyclin pas1. | 0.715 |
GDE1 | CDK3 | A0A1C7NPF3 | A0A1C7N845 | Glycerophosphodiester phosphodiesterase GDE1. | Cyclin-dependent kinase 3; Belongs to the protein kinase superfamily. | 0.981 |
GDE1 | PHO85 | A0A1C7NPF3 | A0A1C7NR53 | Glycerophosphodiester phosphodiesterase GDE1. | Negative regulator of the PHO system; Belongs to the protein kinase superfamily. | 0.981 |
GDE1 | nuc-2 | A0A1C7NPF3 | A0A1C7NCS9 | Glycerophosphodiester phosphodiesterase GDE1. | Ankyrin repeat protein nuc-2. | 0.944 |
GDE1 | pas1_3 | A0A1C7NPF3 | A0A1C7NRR9 | Glycerophosphodiester phosphodiesterase GDE1. | G1/S-specific cyclin pas1. | 0.818 |
LIG4 | cdc17 | A0A1C7MYE7 | A0A1C7N288 | DNA ligase 4; Belongs to the ATP-dependent DNA ligase family. | DNA ligase. | 0.869 |
LIG4 | ku70 | A0A1C7MYE7 | A0A1C7N9Z5 | DNA ligase 4; Belongs to the ATP-dependent DNA ligase family. | ATP-dependent DNA helicase II subunit 1. | 0.989 |
LIG4 | ku80 | A0A1C7MYE7 | A0A1C7N332 | DNA ligase 4; Belongs to the ATP-dependent DNA ligase family. | ATP-dependent DNA helicase II subunit 2. | 0.990 |
LIG4 | pas1_3 | A0A1C7MYE7 | A0A1C7NRR9 | DNA ligase 4; Belongs to the ATP-dependent DNA ligase family. | G1/S-specific cyclin pas1. | 0.734 |
LIG4 | pso2 | A0A1C7MYE7 | A0A1C7N0Y4 | DNA ligase 4; Belongs to the ATP-dependent DNA ligase family. | DNA cross-link repair protein pso2/snm1. | 0.925 |
PHO85 | ATG1 | A0A1C7NR53 | A0A1C7N2F9 | Negative regulator of the PHO system; Belongs to the protein kinase superfamily. | Serine/threonine-protein kinase ATG1; Belongs to the protein kinase superfamily. | 0.765 |
PHO85 | GDE1 | A0A1C7NR53 | A0A1C7NPF3 | Negative regulator of the PHO system; Belongs to the protein kinase superfamily. | Glycerophosphodiester phosphodiesterase GDE1. | 0.981 |
PHO85 | ku70 | A0A1C7NR53 | A0A1C7N9Z5 | Negative regulator of the PHO system; Belongs to the protein kinase superfamily. | ATP-dependent DNA helicase II subunit 1. | 0.606 |
page 1 of 3