STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0J61_00088SAP domain-containing protein. (495 aa)    
Predicted Functional Partners:
ash2
Set1 complex component ash2.
    
 0.821
RBBP5
Retinoblastoma-binding protein 5.
    
 0.816
HHT1
Histone H3; Belongs to the histone H3 family.
    
 0.788
H3.1
Histone H3; Belongs to the histone H3 family.
    
 0.788
HTB1_0
Histone H2B; Belongs to the histone H2B family.
    
  0.759
HTB1_1
Histone H2B; Belongs to the histone H2B family.
    
  0.759
A0J61_07528
Uncharacterized protein.
   
 0.749
hta1
Histone H2A-alpha; Belongs to the histone H2A family.
    
  0.660
CMC4
Cx9C motif-containing protein 4, mitochondrial.
    
  0.660
hta2
Histone H2A; Belongs to the histone H2A family.
    
  0.660
Your Current Organism:
Choanephora cucurbitarum
NCBI taxonomy Id: 101091
Other names: C. cucurbitarum, Choanephora infundibulifera f. cucurbitarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.