STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trappc10Trafficking protein particle complex subunit 10. (1181 aa)    
Predicted Functional Partners:
TRAPPC2
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.999
bet5
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.999
trs31
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.
    
 0.999
BET3
Trafficking protein particle complex subunit BET3.
    
 0.999
TRAPPC6B
Trafficking protein particle complex subunit 6B.
    
 0.999
trappc2l
Trafficking protein particle complex subunit 2-like protein.
    
 0.999
Trappc12
Trafficking protein particle complex subunit 12.
    
 0.987
trappc11
Trafficking protein particle complex subunit 11.
     
 0.985
trappc13
Trafficking protein particle complex subunit 13.
     
 0.985
A0J61_03748
Uncharacterized protein.
   
 0.979
Your Current Organism:
Choanephora cucurbitarum
NCBI taxonomy Id: 101091
Other names: C. cucurbitarum, Choanephora infundibulifera f. cucurbitarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.