Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Exosc1 | Exosc10 | ENSRNOP00000067627 | ENSRNOP00000014629 | RCG57589, isoform CRA_a. | RCG30986, isoform CRA_a. | 0.997 |
Exosc1 | Exosc2 | ENSRNOP00000067627 | ENSRNOP00000012311 | RCG57589, isoform CRA_a. | Exosome component 2 (Predicted). | 0.999 |
Exosc1 | Exosc3 | ENSRNOP00000067627 | ENSRNOP00000016582 | RCG57589, isoform CRA_a. | Exosome component 3. | 0.999 |
Exosc1 | Exosc7 | ENSRNOP00000067627 | ENSRNOP00000069523 | RCG57589, isoform CRA_a. | Exosome component 7. | 0.999 |
Exosc1 | Exosc8 | ENSRNOP00000067627 | ENSRNOP00000073348 | RCG57589, isoform CRA_a. | Exosome component 8. | 0.999 |
Exosc1 | Exosc9 | ENSRNOP00000067627 | ENSRNOP00000020662 | RCG57589, isoform CRA_a. | Exosome complex component RRP45; Non-catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. In the nucleus, the RNA exosome complex is involved in proper maturation of stable RNA species such as rRNA, snRNA and snoRNA, in the elimination of RNA processing by-products and non-coding 'pervasive' transcripts, such as antisense RNA species and promoter-upstream transcripts (PROMPTs), and of mRNAs with processing defects, thereby limiting or excluding their export to the cyto [...] | 0.999 |
Exosc1 | Skiv2l | ENSRNOP00000067627 | ENSRNOP00000000481 | RCG57589, isoform CRA_a. | Ski2-like RNA helicase. | 0.882 |
Exosc1 | Ttc37 | ENSRNOP00000067627 | ENSRNOP00000058722 | RCG57589, isoform CRA_a. | Tetratricopeptide repeat domain 37. | 0.757 |
Exosc1 | Wdr61 | ENSRNOP00000067627 | ENSRNOP00000017239 | RCG57589, isoform CRA_a. | WD repeat-containing protein 61, N-terminally processed; Component of the PAF1 complex (PAF1C) which has multiple functions during transcription by RNA polymerase II and is implicated in regulation of development and maintenance of embryonic stem cell pluripotency. PAF1C associates with RNA polymerase II through interaction with POLR2A CTD non-phosphorylated and 'Ser-2'- and 'Ser- 5'-phosphorylated forms and is involved in transcriptional elongation, acting both indepentently and synergistically with TCEA1 and in cooperation with the DSIF complex and HTATSF1. PAF1C is required for tran [...] | 0.763 |
Exosc1 | Xrn1 | ENSRNOP00000067627 | ENSRNOP00000014481 | RCG57589, isoform CRA_a. | 5'-3' exoribonuclease 1. | 0.692 |
Exosc10 | Exosc1 | ENSRNOP00000014629 | ENSRNOP00000067627 | RCG30986, isoform CRA_a. | RCG57589, isoform CRA_a. | 0.997 |
Exosc10 | Exosc2 | ENSRNOP00000014629 | ENSRNOP00000012311 | RCG30986, isoform CRA_a. | Exosome component 2 (Predicted). | 0.996 |
Exosc10 | Exosc3 | ENSRNOP00000014629 | ENSRNOP00000016582 | RCG30986, isoform CRA_a. | Exosome component 3. | 0.997 |
Exosc10 | Exosc7 | ENSRNOP00000014629 | ENSRNOP00000069523 | RCG30986, isoform CRA_a. | Exosome component 7. | 0.996 |
Exosc10 | Exosc8 | ENSRNOP00000014629 | ENSRNOP00000073348 | RCG30986, isoform CRA_a. | Exosome component 8. | 0.997 |
Exosc10 | Exosc9 | ENSRNOP00000014629 | ENSRNOP00000020662 | RCG30986, isoform CRA_a. | Exosome complex component RRP45; Non-catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. In the nucleus, the RNA exosome complex is involved in proper maturation of stable RNA species such as rRNA, snRNA and snoRNA, in the elimination of RNA processing by-products and non-coding 'pervasive' transcripts, such as antisense RNA species and promoter-upstream transcripts (PROMPTs), and of mRNAs with processing defects, thereby limiting or excluding their export to the cyto [...] | 0.997 |
Exosc10 | Skiv2l | ENSRNOP00000014629 | ENSRNOP00000000481 | RCG30986, isoform CRA_a. | Ski2-like RNA helicase. | 0.856 |
Exosc10 | Ttc37 | ENSRNOP00000014629 | ENSRNOP00000058722 | RCG30986, isoform CRA_a. | Tetratricopeptide repeat domain 37. | 0.538 |
Exosc10 | Wdr61 | ENSRNOP00000014629 | ENSRNOP00000017239 | RCG30986, isoform CRA_a. | WD repeat-containing protein 61, N-terminally processed; Component of the PAF1 complex (PAF1C) which has multiple functions during transcription by RNA polymerase II and is implicated in regulation of development and maintenance of embryonic stem cell pluripotency. PAF1C associates with RNA polymerase II through interaction with POLR2A CTD non-phosphorylated and 'Ser-2'- and 'Ser- 5'-phosphorylated forms and is involved in transcriptional elongation, acting both indepentently and synergistically with TCEA1 and in cooperation with the DSIF complex and HTATSF1. PAF1C is required for tran [...] | 0.476 |
Exosc10 | Xrn1 | ENSRNOP00000014629 | ENSRNOP00000014481 | RCG30986, isoform CRA_a. | 5'-3' exoribonuclease 1. | 0.730 |
page 1 of 6