STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Msl3l2Male-specific lethal 3-like 2 (Drosophila). (371 aa)    
Predicted Functional Partners:
Msl1
Similar to RIKEN cDNA 4121402D02 (Predicted), isoform CRA_b.
    
 0.960
Msl2
Male-specific lethal 2-like 1 (Drosophila) (Predicted).
    
 0.955
Meaf6
MYST/Esa1-associated factor 6.
   
 0.817
Dmap1
DNA methyltransferase 1-associated protein 1.
    
 0.811
Mrgbp
MRG domain-binding protein.
   
 0.801
LOC103691995
MRG/MORF4L binding protein.
   
 0.801
Kat8
Histone acetyltransferase KAT8; Histone acetyltransferase which may be involved in transcriptional activation. May influence the function of ATM. As part of the MSL complex it is involved in acetylation of nucleosomal histone H4 producing specifically H4K16ac. As part of the NSL complex it may be involved in acetylation of nucleosomal histone H4 on several lysine residues. That activity is less specific than the one of the MSL complex. Can also acetylate TP53/p53 at 'Lys-120'.
    
 0.779
Epc1
Enhancer of polycomb homolog 1 (Drosophila) (Predicted).
   
 0.770
Epc2
Enhancer of polycomb homolog.
   
 0.770
Vps72
Vacuolar protein sorting 72 homolog (S. cerevisiae).
    
 0.768
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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