STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Evi5lEcotropic viral integration site 5-like. (501 aa)    
Predicted Functional Partners:
Mrpl30
39S ribosomal protein L30, mitochondrial; Belongs to the universal ribosomal protein uL30 family.
      
 0.771
Pogk
Pogo transposable element-derived with KRAB domain.
      
 0.683
Akap17a
A-kinase-anchoring protein 17A.
      
 0.624
Tbc1d30
TBC1 domain family, member 30.
    
 
 0.571
Intu
Protein inturned; Plays a key role in ciliogenesis and embryonic development. Regulator of cilia formation by controlling the organization of the apical actin cytoskeleton and the positioning of the basal bodies at the apical cell surface, which in turn is essential for the normal orientation of elongating ciliary microtubules. Plays a key role in definition of cell polarity via its role in ciliogenesis but not via conversion extension. Has an indirect effect on hedgehog signaling (By similarity). Proposed to function as core component of the CPLANE (ciliogenesis and planar polarity ef [...]
   
  
 0.514
Tbc1d5
TBC1 domain family, member 5.
      
 0.485
Rab23
RAB23, member RAS oncogene family (Predicted).
      
 0.477
Cplane2
Similar to novel protein (Predicted), isoform CRA_b.
    
 
 0.471
Ankmy1
Ankyrin repeat and MYND domain-containing 1.
   
  
 0.469
Tbc1d15
TBC1 domain family, member 15.
      
 0.454
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.