Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lfng | Mesp2 | ENSRNOP00000001682 | ENSRNOP00000020047 | Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe; Glycosyltransferase that initiates the elongation of O-linked fucose residues attached to EGF-like repeats in the extracellular domain of Notch molecules. Modulates NOTCH1 activity by modifying O- fucose residues at specific EGF-like domains resulting in inhibition of NOTCH1 activation by JAG1 and enhancement of NOTCH1 activation by DLL1 via an increase in its binding to DLL1. Decreases the binding of JAG1 to NOTCH2 but not that of DLL1. Essential mediator of somite segmentation and patterning. | Mesoderm posterior bHLH transcription factor 2. | 0.733 |
| Lfng | Ripply2 | ENSRNOP00000001682 | ENSRNOP00000013285 | Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe; Glycosyltransferase that initiates the elongation of O-linked fucose residues attached to EGF-like repeats in the extracellular domain of Notch molecules. Modulates NOTCH1 activity by modifying O- fucose residues at specific EGF-like domains resulting in inhibition of NOTCH1 activation by JAG1 and enhancement of NOTCH1 activation by DLL1 via an increase in its binding to DLL1. Decreases the binding of JAG1 to NOTCH2 but not that of DLL1. Essential mediator of somite segmentation and patterning. | Ripply transcriptional repressor 2. | 0.549 |
| Lfng | Tbx6 | ENSRNOP00000001682 | ENSRNOP00000060687 | Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe; Glycosyltransferase that initiates the elongation of O-linked fucose residues attached to EGF-like repeats in the extracellular domain of Notch molecules. Modulates NOTCH1 activity by modifying O- fucose residues at specific EGF-like domains resulting in inhibition of NOTCH1 activation by JAG1 and enhancement of NOTCH1 activation by DLL1 via an increase in its binding to DLL1. Decreases the binding of JAG1 to NOTCH2 but not that of DLL1. Essential mediator of somite segmentation and patterning. | T-box transcription factor TBX6; T-box transcription factor that plays an essential role in the determination of the fate of axial stem cells: neural vs mesodermal. Acts in part by down-regulating, a specific enhancer (N1) of SOX2, to inhibit neural development. Seems to also play an essential role in left/right axis determination and acts through effects on Notch signaling around the node as well as through an effect on the morphology and motility of the nodal cilia (By similarity). | 0.540 |
| Lfng | Uncx | ENSRNOP00000001682 | ENSRNOP00000001730 | Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe; Glycosyltransferase that initiates the elongation of O-linked fucose residues attached to EGF-like repeats in the extracellular domain of Notch molecules. Modulates NOTCH1 activity by modifying O- fucose residues at specific EGF-like domains resulting in inhibition of NOTCH1 activation by JAG1 and enhancement of NOTCH1 activation by DLL1 via an increase in its binding to DLL1. Decreases the binding of JAG1 to NOTCH2 but not that of DLL1. Essential mediator of somite segmentation and patterning. | Homeobox protein unc-4 homolog; Transcription factor involved in somitogenesis and neurogenesis. Required for the maintenance and differentiation of particular elements of the axial skeleton. May act upstream of PAX9. Plays a role in controlling the development of connections of hypothalamic neurons to pituitary elements, allowing central neurons to reach the peripheral blood circulation and to deliver hormones for control of peripheral functions (By similarity). | 0.635 |
| Marchf11 | Uncx | ENSRNOP00000035881 | ENSRNOP00000001730 | E3 ubiquitin-protein ligase MARCHF11; E3 ubiquitin-protein ligase that mediates polyubiquitination of CD4. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin- conjugating enzyme in the form of a thioester and then directly transfer the ubiquitin to targeted substrates. May play a role in ubuquitin-dependent protein sorting in developmenting spermatids. | Homeobox protein unc-4 homolog; Transcription factor involved in somitogenesis and neurogenesis. Required for the maintenance and differentiation of particular elements of the axial skeleton. May act upstream of PAX9. Plays a role in controlling the development of connections of hypothalamic neurons to pituitary elements, allowing central neurons to reach the peripheral blood circulation and to deliver hormones for control of peripheral functions (By similarity). | 0.487 |
| Mesp2 | Lfng | ENSRNOP00000020047 | ENSRNOP00000001682 | Mesoderm posterior bHLH transcription factor 2. | Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe; Glycosyltransferase that initiates the elongation of O-linked fucose residues attached to EGF-like repeats in the extracellular domain of Notch molecules. Modulates NOTCH1 activity by modifying O- fucose residues at specific EGF-like domains resulting in inhibition of NOTCH1 activation by JAG1 and enhancement of NOTCH1 activation by DLL1 via an increase in its binding to DLL1. Decreases the binding of JAG1 to NOTCH2 but not that of DLL1. Essential mediator of somite segmentation and patterning. | 0.733 |
| Mesp2 | Pax1 | ENSRNOP00000020047 | ENSRNOP00000062281 | Mesoderm posterior bHLH transcription factor 2. | Paired box gene 1 (Mapped). | 0.459 |
| Mesp2 | Ripply1 | ENSRNOP00000020047 | ENSRNOP00000074028 | Mesoderm posterior bHLH transcription factor 2. | Ripply transcriptional repressor 1. | 0.646 |
| Mesp2 | Ripply2 | ENSRNOP00000020047 | ENSRNOP00000013285 | Mesoderm posterior bHLH transcription factor 2. | Ripply transcriptional repressor 2. | 0.801 |
| Mesp2 | Tbx18 | ENSRNOP00000020047 | ENSRNOP00000014657 | Mesoderm posterior bHLH transcription factor 2. | T-box18 (Predicted), isoform CRA_a. | 0.472 |
| Mesp2 | Tbx6 | ENSRNOP00000020047 | ENSRNOP00000060687 | Mesoderm posterior bHLH transcription factor 2. | T-box transcription factor TBX6; T-box transcription factor that plays an essential role in the determination of the fate of axial stem cells: neural vs mesodermal. Acts in part by down-regulating, a specific enhancer (N1) of SOX2, to inhibit neural development. Seems to also play an essential role in left/right axis determination and acts through effects on Notch signaling around the node as well as through an effect on the morphology and motility of the nodal cilia (By similarity). | 0.794 |
| Mesp2 | Uncx | ENSRNOP00000020047 | ENSRNOP00000001730 | Mesoderm posterior bHLH transcription factor 2. | Homeobox protein unc-4 homolog; Transcription factor involved in somitogenesis and neurogenesis. Required for the maintenance and differentiation of particular elements of the axial skeleton. May act upstream of PAX9. Plays a role in controlling the development of connections of hypothalamic neurons to pituitary elements, allowing central neurons to reach the peripheral blood circulation and to deliver hormones for control of peripheral functions (By similarity). | 0.672 |
| Pax1 | Mesp2 | ENSRNOP00000062281 | ENSRNOP00000020047 | Paired box gene 1 (Mapped). | Mesoderm posterior bHLH transcription factor 2. | 0.459 |
| Pax1 | Ripply1 | ENSRNOP00000062281 | ENSRNOP00000074028 | Paired box gene 1 (Mapped). | Ripply transcriptional repressor 1. | 0.435 |
| Pax1 | Tbx6 | ENSRNOP00000062281 | ENSRNOP00000060687 | Paired box gene 1 (Mapped). | T-box transcription factor TBX6; T-box transcription factor that plays an essential role in the determination of the fate of axial stem cells: neural vs mesodermal. Acts in part by down-regulating, a specific enhancer (N1) of SOX2, to inhibit neural development. Seems to also play an essential role in left/right axis determination and acts through effects on Notch signaling around the node as well as through an effect on the morphology and motility of the nodal cilia (By similarity). | 0.521 |
| Pax1 | Uncx | ENSRNOP00000062281 | ENSRNOP00000001730 | Paired box gene 1 (Mapped). | Homeobox protein unc-4 homolog; Transcription factor involved in somitogenesis and neurogenesis. Required for the maintenance and differentiation of particular elements of the axial skeleton. May act upstream of PAX9. Plays a role in controlling the development of connections of hypothalamic neurons to pituitary elements, allowing central neurons to reach the peripheral blood circulation and to deliver hormones for control of peripheral functions (By similarity). | 0.526 |
| Ripply1 | Mesp2 | ENSRNOP00000074028 | ENSRNOP00000020047 | Ripply transcriptional repressor 1. | Mesoderm posterior bHLH transcription factor 2. | 0.646 |
| Ripply1 | Pax1 | ENSRNOP00000074028 | ENSRNOP00000062281 | Ripply transcriptional repressor 1. | Paired box gene 1 (Mapped). | 0.435 |
| Ripply1 | Tbx18 | ENSRNOP00000074028 | ENSRNOP00000014657 | Ripply transcriptional repressor 1. | T-box18 (Predicted), isoform CRA_a. | 0.439 |
| Ripply1 | Tbx6 | ENSRNOP00000074028 | ENSRNOP00000060687 | Ripply transcriptional repressor 1. | T-box transcription factor TBX6; T-box transcription factor that plays an essential role in the determination of the fate of axial stem cells: neural vs mesodermal. Acts in part by down-regulating, a specific enhancer (N1) of SOX2, to inhibit neural development. Seems to also play an essential role in left/right axis determination and acts through effects on Notch signaling around the node as well as through an effect on the morphology and motility of the nodal cilia (By similarity). | 0.508 |
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