STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zfp68Zinc finger protein 68 (Predicted), isoform CRA_a. (592 aa)    
Predicted Functional Partners:
Mrps9
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.597
RGD1564865
Similar to 20-alpha-hydroxysteroid dehydrogenase.
    
 
 0.573
Ust5r
Integral membrane transport protein UST5r.
    
 
 0.550
UST4r
Integral membrane transport protein UST4r.
   
 
 0.548
Rup2
Urinary protein 1.
    
 
 0.530
Nim1k
NIM1 serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 
 0.501
Zfp37
Zinc finger protein 37.
      
 0.497
Rpl23
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
    
 
 0.496
Zfp622
Zinc finger protein 622.
    
 
 0.495
Zfp644
Zinc finger protein 644 (Predicted), isoform CRA_a.
   
 
 0.486
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.