STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nsun5NOL1/NOP2/Sun domain family, member 5 (Predicted); Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (451 aa)    
Predicted Functional Partners:
Nsun4
NOL1/NOP2/Sun domain family, member 4 (Predicted); Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
  
 0.872
LOC103690007
NOP2/Sun RNA methyltransferase 4.
   
  
 0.871
Noc4l
Nucleolar complex protein 4 homolog.
   
 
 0.773
Bop1
Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.759
Wdr74
RCG47471, isoform CRA_a.
   
 
 0.749
Bud23
BUD23, rRNA methyltransferase and ribosome maturation factor.
   
  
 0.748
Trdmt1
tRNA (cytosine(38)-C(5))-methyltransferase; Specifically methylates cytosine 38 in the anticodon loop of tRNA(Asp).
   
  
 0.746
Noc2l
NOC2-like nucleolar-associated transcriptional repressor.
   
 
 0.740
Rpf1
Ribosome production factor 1; May be required for ribosome biogenesis.
   
 
 0.725
Mettl1
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family.
   
 
 0.723
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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