Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ipo4 | Ipo5 | ENSRNOP00000026552 | ENSRNOP00000014859 | Importin 4 (Predicted), isoform CRA_b. | Importin 5. | 0.843 |
Ipo4 | Ipo9 | ENSRNOP00000026552 | ENSRNOP00000011105 | Importin 4 (Predicted), isoform CRA_b. | Importin 9 (Predicted). | 0.726 |
Ipo4 | Nup98 | ENSRNOP00000026552 | ENSRNOP00000027575 | Importin 4 (Predicted), isoform CRA_b. | Nuclear pore complex protein Nup98-Nup96; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance. Involved in the bidirectional transport across the NPC. May anchor NUP153 and TPR to the NPC. Belongs to the nucleoporin GLFG family. | 0.546 |
Ipo4 | Ran | ENSRNOP00000026552 | ENSRNOP00000001247 | Importin 4 (Predicted), isoform CRA_b. | GTP-binding nuclear protein Ran; GTPase involved in nucleocytoplasmic transport, participating both to the import and the export from the nucleus of proteins and RNAs. Switches between a cytoplasmic GDP- and a nuclear GTP-bound state by nucleotide exchange and GTP hydrolysis. Nuclear import receptors such as importin beta bind their substrates only in the absence of GTP- bound RAN and release them upon direct interaction with GTP-bound RAN, while export receptors behave in the opposite way. Thereby, RAN controls cargo loading and release by transport receptors in the proper compartment [...] | 0.817 |
Ipo4 | Ranbp6 | ENSRNOP00000026552 | ENSRNOP00000074790 | Importin 4 (Predicted), isoform CRA_b. | RAN-binding protein 6. | 0.762 |
Ipo4 | Tnpo2 | ENSRNOP00000026552 | ENSRNOP00000005571 | Importin 4 (Predicted), isoform CRA_b. | Transportin 2 (Importin 3, karyopherin beta 2b) (Predicted). | 0.729 |
Ipo4 | Tnpo3 | ENSRNOP00000026552 | ENSRNOP00000040222 | Importin 4 (Predicted), isoform CRA_b. | Transportin 3. | 0.657 |
Ipo4 | Xpo1 | ENSRNOP00000026552 | ENSRNOP00000014062 | Importin 4 (Predicted), isoform CRA_b. | Exportin-1; Mediates the nuclear export of cellular proteins (cargos) bearing a leucine-rich nuclear export signal (NES) and of RNAs. In the nucleus, in association with RANBP3, binds cooperatively to the NES on its target protein and to the GTPase Ran in its active GTP-bound form. Docking of this complex to the nuclear pore complex (NPC) is mediated through binding to nucleoporins. Upon transit of a nuclear export complex into the cytoplasm, disassembling of the complex and hydrolysis of Ran-GTP to Ran-GDP (induced by RANBP1 and RANGAP1, respectively) cause release of the cargo from t [...] | 0.801 |
Ipo4 | Xpo7 | ENSRNOP00000026552 | ENSRNOP00000018441 | Importin 4 (Predicted), isoform CRA_b. | Exportin 7. | 0.456 |
Ipo5 | Ipo4 | ENSRNOP00000014859 | ENSRNOP00000026552 | Importin 5. | Importin 4 (Predicted), isoform CRA_b. | 0.843 |
Ipo5 | Ipo9 | ENSRNOP00000014859 | ENSRNOP00000011105 | Importin 5. | Importin 9 (Predicted). | 0.762 |
Ipo5 | Nup98 | ENSRNOP00000014859 | ENSRNOP00000027575 | Importin 5. | Nuclear pore complex protein Nup98-Nup96; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance. Involved in the bidirectional transport across the NPC. May anchor NUP153 and TPR to the NPC. Belongs to the nucleoporin GLFG family. | 0.678 |
Ipo5 | Ran | ENSRNOP00000014859 | ENSRNOP00000001247 | Importin 5. | GTP-binding nuclear protein Ran; GTPase involved in nucleocytoplasmic transport, participating both to the import and the export from the nucleus of proteins and RNAs. Switches between a cytoplasmic GDP- and a nuclear GTP-bound state by nucleotide exchange and GTP hydrolysis. Nuclear import receptors such as importin beta bind their substrates only in the absence of GTP- bound RAN and release them upon direct interaction with GTP-bound RAN, while export receptors behave in the opposite way. Thereby, RAN controls cargo loading and release by transport receptors in the proper compartment [...] | 0.693 |
Ipo5 | Tnpo2 | ENSRNOP00000014859 | ENSRNOP00000005571 | Importin 5. | Transportin 2 (Importin 3, karyopherin beta 2b) (Predicted). | 0.672 |
Ipo5 | Tnpo3 | ENSRNOP00000014859 | ENSRNOP00000040222 | Importin 5. | Transportin 3. | 0.452 |
Ipo5 | Xpo1 | ENSRNOP00000014859 | ENSRNOP00000014062 | Importin 5. | Exportin-1; Mediates the nuclear export of cellular proteins (cargos) bearing a leucine-rich nuclear export signal (NES) and of RNAs. In the nucleus, in association with RANBP3, binds cooperatively to the NES on its target protein and to the GTPase Ran in its active GTP-bound form. Docking of this complex to the nuclear pore complex (NPC) is mediated through binding to nucleoporins. Upon transit of a nuclear export complex into the cytoplasm, disassembling of the complex and hydrolysis of Ran-GTP to Ran-GDP (induced by RANBP1 and RANGAP1, respectively) cause release of the cargo from t [...] | 0.791 |
Ipo5 | Xpo7 | ENSRNOP00000014859 | ENSRNOP00000018441 | Importin 5. | Exportin 7. | 0.584 |
Ipo9 | Ipo4 | ENSRNOP00000011105 | ENSRNOP00000026552 | Importin 9 (Predicted). | Importin 4 (Predicted), isoform CRA_b. | 0.726 |
Ipo9 | Ipo5 | ENSRNOP00000011105 | ENSRNOP00000014859 | Importin 9 (Predicted). | Importin 5. | 0.762 |
Ipo9 | Ran | ENSRNOP00000011105 | ENSRNOP00000001247 | Importin 9 (Predicted). | GTP-binding nuclear protein Ran; GTPase involved in nucleocytoplasmic transport, participating both to the import and the export from the nucleus of proteins and RNAs. Switches between a cytoplasmic GDP- and a nuclear GTP-bound state by nucleotide exchange and GTP hydrolysis. Nuclear import receptors such as importin beta bind their substrates only in the absence of GTP- bound RAN and release them upon direct interaction with GTP-bound RAN, while export receptors behave in the opposite way. Thereby, RAN controls cargo loading and release by transport receptors in the proper compartment [...] | 0.518 |
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