Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Ccdc33 | Clk3 | ENSRNOP00000055287 | ENSRNOP00000061691 | Coiled-coil domain-containing protein 33. | Dual specificity protein kinase CLK3; Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine- rich (SR) proteins of the spliceosomal complex. May be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing and can cause redistribution of SR proteins from speckles to a diffuse nucleoplasmic distribution. Phosphorylates SRSF1 and SRSF3. Regulates the alternative splicing of tissue factor (F3) pre- mRNA in endothelial cells (By similarity). | 0.451 |
| Ccdc33 | Islr2 | ENSRNOP00000055287 | ENSRNOP00000064244 | Coiled-coil domain-containing protein 33. | Immunoglobulin superfamily-containing leucine-rich repeat 2. | 0.460 |
| Ccdc33 | Ubl7 | ENSRNOP00000055287 | ENSRNOP00000010083 | Coiled-coil domain-containing protein 33. | Bone marrow stromal cell-derived ubiquitin-like protein. | 0.723 |
| Clk3 | Ccdc33 | ENSRNOP00000061691 | ENSRNOP00000055287 | Dual specificity protein kinase CLK3; Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine- rich (SR) proteins of the spliceosomal complex. May be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing and can cause redistribution of SR proteins from speckles to a diffuse nucleoplasmic distribution. Phosphorylates SRSF1 and SRSF3. Regulates the alternative splicing of tissue factor (F3) pre- mRNA in endothelial cells (By similarity). | Coiled-coil domain-containing protein 33. | 0.451 |
| Clk3 | Islr2 | ENSRNOP00000061691 | ENSRNOP00000064244 | Dual specificity protein kinase CLK3; Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine- rich (SR) proteins of the spliceosomal complex. May be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing and can cause redistribution of SR proteins from speckles to a diffuse nucleoplasmic distribution. Phosphorylates SRSF1 and SRSF3. Regulates the alternative splicing of tissue factor (F3) pre- mRNA in endothelial cells (By similarity). | Immunoglobulin superfamily-containing leucine-rich repeat 2. | 0.421 |
| Clk3 | Ubl7 | ENSRNOP00000061691 | ENSRNOP00000010083 | Dual specificity protein kinase CLK3; Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine- rich (SR) proteins of the spliceosomal complex. May be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing and can cause redistribution of SR proteins from speckles to a diffuse nucleoplasmic distribution. Phosphorylates SRSF1 and SRSF3. Regulates the alternative splicing of tissue factor (F3) pre- mRNA in endothelial cells (By similarity). | Bone marrow stromal cell-derived ubiquitin-like protein. | 0.701 |
| Fbxw10 | Rnf123 | ENSRNOP00000069928 | ENSRNOP00000049507 | F-box and WD-40 domain protein 10. | E3 ubiquitin-protein ligase RNF123; Catalytic subunit of the KPC complex that acts as E3 ubiquitin-protein ligase. Promotes the ubiquitination and proteasome- mediated degradation of CDKN1B which is the cyclin-dependent kinase inhibitor at the G0-G1 transition of the cell cycle. Functions also as an inhibitor of innate antiviral signaling mediated by DDX58 and IFIH1 independently of its E3 ligase activity. Interacts with the N-terminal CARD domains of DDX58 and IFIH1 and competes with the downstream adapter MAVS. | 0.474 |
| Fbxw10 | Uba52 | ENSRNOP00000069928 | ENSRNOP00000027073 | F-box and WD-40 domain protein 10. | Ubiquitin-60S ribosomal protein L40; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be in [...] | 0.529 |
| Fbxw10 | Ubc | ENSRNOP00000069928 | ENSRNOP00000074688 | F-box and WD-40 domain protein 10. | Ubiquitin-related; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repa [...] | 0.563 |
| Fbxw10 | Ubl7 | ENSRNOP00000069928 | ENSRNOP00000010083 | F-box and WD-40 domain protein 10. | Bone marrow stromal cell-derived ubiquitin-like protein. | 0.769 |
| Islr2 | Ccdc33 | ENSRNOP00000064244 | ENSRNOP00000055287 | Immunoglobulin superfamily-containing leucine-rich repeat 2. | Coiled-coil domain-containing protein 33. | 0.460 |
| Islr2 | Clk3 | ENSRNOP00000064244 | ENSRNOP00000061691 | Immunoglobulin superfamily-containing leucine-rich repeat 2. | Dual specificity protein kinase CLK3; Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine- rich (SR) proteins of the spliceosomal complex. May be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing and can cause redistribution of SR proteins from speckles to a diffuse nucleoplasmic distribution. Phosphorylates SRSF1 and SRSF3. Regulates the alternative splicing of tissue factor (F3) pre- mRNA in endothelial cells (By similarity). | 0.421 |
| Islr2 | Ubl7 | ENSRNOP00000064244 | ENSRNOP00000010083 | Immunoglobulin superfamily-containing leucine-rich repeat 2. | Bone marrow stromal cell-derived ubiquitin-like protein. | 0.640 |
| Nbr1 | Psmd4 | ENSRNOP00000028149 | ENSRNOP00000028589 | Next to BRCA1 gene 1 protein; Acts probably as a receptor for selective autophagosomal degradation of ubiquitinated targets. | Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 4, isoform CRA_a. | 0.570 |
| Nbr1 | Uba52 | ENSRNOP00000028149 | ENSRNOP00000027073 | Next to BRCA1 gene 1 protein; Acts probably as a receptor for selective autophagosomal degradation of ubiquitinated targets. | Ubiquitin-60S ribosomal protein L40; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be in [...] | 0.970 |
| Nbr1 | Ubc | ENSRNOP00000028149 | ENSRNOP00000074688 | Next to BRCA1 gene 1 protein; Acts probably as a receptor for selective autophagosomal degradation of ubiquitinated targets. | Ubiquitin-related; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repa [...] | 0.806 |
| Nbr1 | Ubl7 | ENSRNOP00000028149 | ENSRNOP00000010083 | Next to BRCA1 gene 1 protein; Acts probably as a receptor for selective autophagosomal degradation of ubiquitinated targets. | Bone marrow stromal cell-derived ubiquitin-like protein. | 0.722 |
| Psmd4 | Nbr1 | ENSRNOP00000028589 | ENSRNOP00000028149 | Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 4, isoform CRA_a. | Next to BRCA1 gene 1 protein; Acts probably as a receptor for selective autophagosomal degradation of ubiquitinated targets. | 0.570 |
| Psmd4 | Uba52 | ENSRNOP00000028589 | ENSRNOP00000027073 | Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 4, isoform CRA_a. | Ubiquitin-60S ribosomal protein L40; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be in [...] | 0.973 |
| Psmd4 | Ubc | ENSRNOP00000028589 | ENSRNOP00000074688 | Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 4, isoform CRA_a. | Ubiquitin-related; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repa [...] | 0.981 |
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