STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Agbl4Peptidase_M14 domain-containing protein. (227 aa)    
Predicted Functional Partners:
Bcl2l14
Apoptosis facilitator Bcl-2-like protein 14; Plays a role in apoptosis.
      
 0.678
Ttll4
Tubulin tyrosine ligase-like 4.
   
 
 0.674
Dpf3
Double PHD fingers 3.
      
 0.651
Tcp11l1
T-complex 11-like 1.
   
  
 0.619
Ttll6
Tubulin tyrosine ligase-like 6.
      
 0.617
Sntg1
Syntrophin, gamma 1.
   
  
 0.588
Bri3bp
Similar to BRI3-binding protein.
      
 0.570
Smim14
Small integral membrane protein 14.
      
 0.570
Samd8
Sterile alpha motif domain-containing 8.
      
 0.570
Ttl
Tubulin--tyrosine ligase; Catalyzes the post-translational addition of a tyrosine to the C-terminal end of detyrosinated alpha-tubulin.
      
 0.569
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.