STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rnf227Similar to RIKEN cDNA A030009H04. (190 aa)    
Predicted Functional Partners:
Gpr152
G protein-coupled receptor 152; Belongs to the G-protein coupled receptor 1 family.
    
 
 0.702
Gpr171
G protein-coupled receptor 171; Belongs to the G-protein coupled receptor 1 family.
      
 0.629
Gpr162
G protein-coupled receptor 162 (Predicted).
   
 
 0.575
Gpr158
Probable G-protein coupled receptor 158; Orphan receptor; Belongs to the G-protein coupled receptor 3 family.
   
  
 0.569
Gpr82
G protein-coupled receptor 82.
      
 0.535
Gpr89b
G protein-coupled receptor 89B.
    
 
 0.511
Gpr63
G protein-coupled receptor 63.
      
 0.502
Pnma8a
PNMA family member 8A.
   
  
 0.502
Gpr137
G protein-coupled receptor 137.
   
  
 0.501
Paqr9
Progestin and adipoQ receptor family member 9.
   
  
 0.501
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
Server load: medium (44%) [HD]