STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fibcd1l1Fibrinogen C domain containing 1 (Predicted). (459 aa)    
Predicted Functional Partners:
Zfp82-2
Zinc finger protein 82.
    
 
 0.679
Zfp82
Zinc finger protein 82.
    
 
 0.677
Mpped1
Metallophosphoesterase domain containing 1 (Predicted).
   
  
 0.566
C1ql2
Complement C1q-like 2.
   
  
 0.552
Ssc5d
Scavenger receptor cysteine-rich family member with 5 domains.
   
 
 0.543
Cpne4
Copine IV (Predicted), isoform CRA_a.
   
  
 0.520
Pex5l
PEX5-related protein; Accessory subunit of hyperpolarization-activated cyclic nucleotide-gated (HCN) channels, regulating their cell-surface expression and cyclic nucleotide dependence. Belongs to the peroxisomal targeting signal receptor family.
   
  
 0.506
Zfp14
Zinc finger protein 14-like.
    
 
 0.499
Ajap1
Adherens junction-associated protein 1; Plays a role in cell adhesion and cell migration.
   
  
 0.472
Hecw1
Similar to HECT type E3 ubiquitin ligase (Predicted), isoform CRA_b.
   
 
 0.458
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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