STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ttc17Tetratricopeptide repeat protein 17; Plays a role in primary ciliogenesis by modulating actin polymerization; Belongs to the TTC17 family. (1198 aa)    
Predicted Functional Partners:
Ppm1n
Protein phosphatase, Mg2+/Mn2+-dependent 1N.
      
 0.744
Pkd1l1
Polycystin 1-like 1, transient receptor potential channel-interacting.
      
 0.564
Tm4sf4
Transmembrane 4 L6 family member 4; Regulates the adhesive and proliferative status of intestinal epithelial cells. Can mediate density-dependent cell proliferation (By similarity).
   
  
 0.535
Cobll1
Cordon-bleu WH2 repeat protein-like 1.
      
 0.531
Obscn
Obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF.
      
 0.505
Ubfd1
Ubiquitin family domain-containing 1.
      
 0.478
Kif3b
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.468
Vsig10
V-set and immunoglobulin domain-containing 10.
      
 0.467
Heatr5b
HEAT repeat-containing 5B.
   
  
 0.426
Tpgs2
Tubulin polyglutamylase complex subunit 2.
   
  
 0.423
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.