STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fam181bFamily with sequence similarity 181, member B. (419 aa)    
Predicted Functional Partners:
Tmem101
Transmembrane protein 101.
      
 0.730
Tead4
TEA domain transcription factor 4.
    
   0.727
Cts8
Cathepsin 8; Belongs to the peptidase C1 family.
      
 0.693
Fhad1
Forkhead-associated phosphopeptide-binding domain 1.
      
 0.691
Zfp629
Zinc finger protein 629, isoform CRA_b.
   
  
 0.618
Rfxank
Regulatory factor X-associated ankyrin-containing protein.
   
  
 0.572
Nudt2
Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical]; Asymmetrically hydrolyzes Ap4A to yield AMP and ATP. Plays a major role in maintaining homeostasis (By similarity).
      
 0.571
Timmdc1
Complex I assembly factor TIMMDC1, mitochondrial; Chaperone protein involved in the assembly of the mitochondrial NADH:ubiquinone oxidoreductase complex (complex I). Participates in constructing the membrane arm of complex I (By similarity).
      
 0.570
Cog7
Conserved oligomeric Golgi complex subunit 7; Required for normal Golgi function.
      
 0.570
Tbc1d9
TBC1 domain family member 9.
      
 0.539
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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