STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plac9Placenta-associated 9. (109 aa)    
Predicted Functional Partners:
Cphx1
Homeobox domain-containing protein.
      
 0.780
Dux4
Double homeobox 4.
      
 0.712
Tmem254
Transmembrane protein 254.
      
 0.633
F1M6Y6_RAT
Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.
      
 0.562
Eva1c
Eva-1 homolog C.
   
  
 0.553
Pyroxd1
Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1; Probable FAD-dependent oxidoreductase; involved in the cellular oxidative stress response (By similarity). Required for normal sarcomere structure and muscle fiber integrity (By similarity).
      
 0.539
Pkd1l2
Polycystic kidney disease 1 like 2.
      
 0.535
Nipal1
NIPA-like domain containing 1 (Predicted), isoform CRA_a.
      
 0.525
Adat1
Adenosine deaminase, tRNA-specific 1.
      
 0.516
Glt8d2
Glycosyltransferase 8 domain-containing 2.
   
  
 0.516
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.