STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krt27Keratin, type I cytoskeletal 27; Essential for the proper assembly of type I and type II keratin protein complexes and formation of keratin intermediate filaments in the inner root sheath (irs). (449 aa)    
Predicted Functional Partners:
Krt35
Type I hair keratin KA30; Belongs to the intermediate filament family.
  
0.770
Krtap3-2-2
Keratin associated protein 3-3.
   
  
 0.768
Krtap3-1
Keratin-associated protein 3-1.
   
  
 0.765
Krtap3-2
Keratin-associated protein 3-3.
   
  
 0.762
Krt71
RCG50682, isoform CRA_a; Belongs to the intermediate filament family.
  
 
0.758
Krt25
Keratin, type I cytoskeletal 25; Essential for the proper assembly of type I and type II keratin protein complexes and formation of keratin intermediate filaments in the inner root sheath (irs) (By similarity). Plays a role in the cytoskeleton organization (By similarity).
  
0.749
LOC102554371
Keratin-associated protein 17-1.
   
  
 0.713
Krt26
Keratin 26; Belongs to the intermediate filament family.
  
0.690
Krtap4-3
Keratin associated protein 4-3.
      
 0.676
Krt28
Type I keratin KA41; Belongs to the intermediate filament family.
  
0.647
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
Server load: low (36%) [HD]