STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krtap3-1Keratin-associated protein 3-1. (98 aa)    
Predicted Functional Partners:
Krtap11-1
Keratin-associated protein 11-1.
   
 
 0.830
Krtap13-1
Keratin-associated protein 13-1.
   
  
 0.810
LOC102554371
Keratin-associated protein 17-1.
   
  
 0.784
Krt27
Keratin, type I cytoskeletal 27; Essential for the proper assembly of type I and type II keratin protein complexes and formation of keratin intermediate filaments in the inner root sheath (irs).
   
  
 0.765
Krtap4-3
Keratin associated protein 4-3.
      
 0.741
Krtap3-2
Keratin-associated protein 3-3.
  
 
0.716
Krtap8-1
Keratin-associated protein 8-1.
  
  
 0.662
Krtap7-1
Keratin-associated protein 7-1.
  
  
 0.623
Krt85
Type II keratin Kb25; Belongs to the intermediate filament family.
   
  
 0.621
Krtap15-1
Keratin associated protein 15 (Predicted).
   
  
 0.604
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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