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Cdhr1 protein (Rattus norvegicus) - STRING interaction network
"Cdhr1" - Cadherin-related family member 1 in Rattus norvegicus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
Cdhr1Cadherin-related family member 1; Potential calcium-dependent cell-adhesion protein. May be required for the structural integrity of the outer segment (OS) of photoreceptor cells (By similarity) (859 aa)    
Predicted Functional Partners:
Prom1
Prominin-1.s1 splice variant; Prominin 1 (591 aa)
     
 
  0.795
Prom2
Prominin-2; Prominin 2 (885 aa)
     
 
  0.649
Lrit1
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1; Possible role in phototransduction (623 aa)
     
 
  0.568
Kcnv2
Potassium channel, subfamily V, member 2; Belongs to the potassium channel family (561 aa)
     
   
  0.568
Tmem59l
Transmembrane protein 59-like; Modulates the O-glycosylation and complex N- glycosylation steps occurring during the Golgi maturation of APP. Inhibits APP transport to the cell surface and further shedding (By similarity) (331 aa)
     
   
  0.561
Rgs9bp
Regulator of G protein signaling 9 binding protein (237 aa)
     
   
  0.540
Dnajc16
DnaJ (Hsp40) homolog, subfamily C, member 16 (771 aa)
       
 
  0.538
Cnga1
cGMP-gated cation channel alpha-1; Visual signal transduction is mediated by a G-protein coupled cascade using cGMP as second messenger. This protein can be activated by cyclic GMP which leads to an opening of the cation channel and thereby causing a depolarization of rod photoreceptors (683 aa)
     
   
  0.528
Tm4sf5
Transmembrane 4 L six family member 5 (196 aa)
           
  0.526
Rom1
Rod outer segment membrane protein 1; May function as an adhesion molecule involved in stabilization and compaction of outer segment disks or in the maintenance of the curvature of the rim. It is essential for disk morphogenesis (By similarity); Belongs to the PRPH2/ROM1 family (351 aa)
           
  0.525
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Gunn rats, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus norvegicus, Rattus rattiscus, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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