STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krt40Keratin, type I cytoskeletal 40; May play a role in late hair differentiation. (431 aa)    
Predicted Functional Partners:
Krt27
Keratin, type I cytoskeletal 27; Essential for the proper assembly of type I and type II keratin protein complexes and formation of keratin intermediate filaments in the inner root sheath (irs).
  
0.596
Krt26
Keratin 26; Belongs to the intermediate filament family.
  
 
0.504
Krt35
Type I hair keratin KA30; Belongs to the intermediate filament family.
  
 
0.502
Krt32
Keratin 32; Belongs to the intermediate filament family.
  
 
0.481
Krt34
Type I hair keratin KA29; Belongs to the intermediate filament family.
  
 
0.481
Krt25
Keratin, type I cytoskeletal 25; Essential for the proper assembly of type I and type II keratin protein complexes and formation of keratin intermediate filaments in the inner root sheath (irs) (By similarity). Plays a role in the cytoskeleton organization (By similarity).
  
 
0.474
Krt39
Keratin, type I cytoskeletal 39; May play a role in late hair differentiation.
  
 
0.473
Krt24
Keratin, type I cytoskeletal 24; Belongs to the intermediate filament family.
  
  
0.470
Krt36
Type I hair keratin KA31; Belongs to the intermediate filament family.
  
 
0.466
Krt31
Keratin 31; Belongs to the intermediate filament family.
  
 
0.460
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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