STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrp11Low density lipoprotein receptor-related protein 11 (predicted), isoform cra_a; Low density lipoprotein receptor-related protein 11 (232 aa)    
Predicted Functional Partners:
Ppp1r14c
Protein phosphatase 1, regulatory (inhibitor) subunit 14c; Protein phosphatase 1 regulatory subunit 14C; Inhibitor of the PP1 regulatory subunit PPP1CA
   
  
 0.728
Diexf
Digestive organ expansion factor homolog; Regulates the p53 pathway to control the expansion growth of digestive organs
      
 0.623
ENSRNOP00000040527
Ldl receptor-related protein 1b; Low density lipoprotein receptor-related protein 1B
   
  
 0.590
Mro
Maestro
   
  
 0.579
Lrp1b
Low density lipoprotein receptor-related protein 1B
   
  
 0.573
Gdap1l1
Ganglioside-induced differentiation-associated protein 1-like 1
   
  
 0.560
Ldlrad4
Low density lipoprotein receptor class A domain containing 4
      
 0.513
Fbxl16
F-box and leucine-rich repeat protein 16; F-box/LRR-repeat protein 16; Substrate-recognition component of the SCF (SKP1-CUL1-F- box protein)-type E3 ubiquitin ligase complex
   
  
 0.506
Lrp12
Low-density lipoprotein receptor-related protein 3/10/12; Low density lipoprotein receptor-related protein 12
   
  
 0.504
Napg
Gamma-soluble nsf attachment protein; N-ethylmaleimide-sensitive factor attachment protein, gamma
   
  
 0.493
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Gunn rats, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus rattiscus, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.