STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Abcc12Multidrug resistance-associated protein 9; Probable transporter. (1366 aa)    
Predicted Functional Partners:
N4bp1
Nedd4-binding protein 1.
      
 0.567
Abcf2
ATP-binding cassette subfamily F member 2.
   
 
 0.548
Abce1
ATP-binding cassette, sub-family E (OABP), member 1.
      
 0.507
Cnep1r1
CTD nuclear envelope phosphatase 1 regulatory subunit 1.
      
 0.503
LOC680913
Hypothetical protein LOC680913.
   
  
 0.503
Abca12
ATP-binding cassette subfamily A member 12.
   
 
0.436
Brd7
Bromodomain-containing 7.
      
 0.433
Heatr3
HEAT repeat-containing 3.
   
  
 0.432
Lonp2
Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import. May indirectly regulate peroxisomal fatty acid beta- oxidation through degradation of the self-processed forms of TYSND1. Belongs to the peptidase S16 family.
  
  
 0.427
Abca13
ATP-binding cassette subfamily A member 13.
   
 
0.403
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
Server load: low (36%) [HD]