STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PterPhosphotriesterase-related protein; Binds resiniferotoxin, a vanilloid that desensitizes nociceptive neurons. (349 aa)    
Predicted Functional Partners:
Tmem18
Transmembrane protein 18; Transcription repressor. Sequence-specific ssDNA and dsDNA binding protein, with preference for GCT end CTG repeats (By similarity). Cell migration modulator which enhances the glioma- specific migration ability of neural stem cells (NSC) and neural precursor cells (NPC).
      
 0.572
Kctd15
Similar to potassium channel tetramerisation domain containing 15.
   
  
 0.547
Krtap2-1
Keratin-associated protein 2-4-like.
    
 
 0.528
Krtap2-1-2
Keratin associated protein 2-4-like.
    
 
 0.528
Krtap2-1-3
Keratin associated protein 2-4.
    
 
 0.528
Krtap2-1-4
Keratin associated protein 2-1.
    
 
 0.528
Gnpda2
Glucosamine-6-phosphate isomerase.
      
 0.498
Dennd4b
DENN domain-containing 4B.
    
 
 0.496
Tmem160
Transmembrane protein 160.
      
 0.490
Limd2
LIM domain-containing protein 2; Acts as an activator of the protein-kinase ILK, thereby regulating cell motility.
   
 
 0.486
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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