STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbln7Fibulin 7. (440 aa)    
Predicted Functional Partners:
Psg29
Pregnancy-specific glycoprotein 29.
   
 
 0.599
Fndc3a
Fibronectin type III domain containing 3a (Predicted), isoform CRA_a.
    
 
 0.517
Shcbp1l
SHC-binding and spindle-associated 1-like.
      
 0.486
Thnsl2
Threonine synthase-like 2; Acts as a catabolic phospho-lyase on both gamma- and beta- phosphorylated substrates. Degrades O-phospho-threonine (PThr) to alpha-ketobutyrate, ammonia and phosphate (By similarity). Belongs to the threonine synthase family.
      
 0.479
Stac
SH3 and cysteine-rich domain.
    
 
 0.469
Pdzd2
Processed PDZ domain-containing protein 2.
    
 
 0.466
Psg19
Pregnancy specific glycoprotein 19.
   
 
 0.463
Psd4
Pleckstrin and Sec7 domain-containing 4.
      
 0.461
Stac2
SH3 and cysteine rich domain 2 (Predicted), isoform CRA_a.
    
 
 0.457
Fndc3b
Fibronectin type III domain-containing 3B.
    
 
 0.444
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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