Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Fam228b | Ptpn9 | ENSRNOP00000065753 | ENSRNOP00000023831 | Family with sequence similarity 228, member B. | Tyrosine-protein phosphatase non-receptor type 9; Protein-tyrosine phosphatase that could participate in the transfer of hydrophobic ligands or in functions of the Golgi apparatus. | 0.411 |
Fam228b | Ttc22 | ENSRNOP00000065753 | ENSRNOP00000009582 | Family with sequence similarity 228, member B. | Tetratricopeptide repeat domain 22 (Predicted). | 0.640 |
Ptpn9 | Fam228b | ENSRNOP00000023831 | ENSRNOP00000065753 | Tyrosine-protein phosphatase non-receptor type 9; Protein-tyrosine phosphatase that could participate in the transfer of hydrophobic ligands or in functions of the Golgi apparatus. | Family with sequence similarity 228, member B. | 0.411 |
Ptpn9 | Pts | ENSRNOP00000023831 | ENSRNOP00000012434 | Tyrosine-protein phosphatase non-receptor type 9; Protein-tyrosine phosphatase that could participate in the transfer of hydrophobic ligands or in functions of the Golgi apparatus. | 6-pyruvoyl tetrahydrobiopterin synthase; Involved in the biosynthesis of tetrahydrobiopterin, an essential cofactor of aromatic amino acid hydroxylases. Catalyzes the transformation of 7,8-dihydroneopterin triphosphate into 6-pyruvoyl tetrahydropterin; Belongs to the PTPS family. | 0.473 |
Ptpn9 | Sec14l1 | ENSRNOP00000023831 | ENSRNOP00000003690 | Tyrosine-protein phosphatase non-receptor type 9; Protein-tyrosine phosphatase that could participate in the transfer of hydrophobic ligands or in functions of the Golgi apparatus. | Similar to SEC14-like 1 (Predicted). | 0.467 |
Ptpn9 | Ttc22 | ENSRNOP00000023831 | ENSRNOP00000009582 | Tyrosine-protein phosphatase non-receptor type 9; Protein-tyrosine phosphatase that could participate in the transfer of hydrophobic ligands or in functions of the Golgi apparatus. | Tetratricopeptide repeat domain 22 (Predicted). | 0.410 |
Pts | Ptpn9 | ENSRNOP00000012434 | ENSRNOP00000023831 | 6-pyruvoyl tetrahydrobiopterin synthase; Involved in the biosynthesis of tetrahydrobiopterin, an essential cofactor of aromatic amino acid hydroxylases. Catalyzes the transformation of 7,8-dihydroneopterin triphosphate into 6-pyruvoyl tetrahydropterin; Belongs to the PTPS family. | Tyrosine-protein phosphatase non-receptor type 9; Protein-tyrosine phosphatase that could participate in the transfer of hydrophobic ligands or in functions of the Golgi apparatus. | 0.473 |
Sec14l1 | Ptpn9 | ENSRNOP00000003690 | ENSRNOP00000023831 | Similar to SEC14-like 1 (Predicted). | Tyrosine-protein phosphatase non-receptor type 9; Protein-tyrosine phosphatase that could participate in the transfer of hydrophobic ligands or in functions of the Golgi apparatus. | 0.467 |
Ttc22 | Fam228b | ENSRNOP00000009582 | ENSRNOP00000065753 | Tetratricopeptide repeat domain 22 (Predicted). | Family with sequence similarity 228, member B. | 0.640 |
Ttc22 | Ptpn9 | ENSRNOP00000009582 | ENSRNOP00000023831 | Tetratricopeptide repeat domain 22 (Predicted). | Tyrosine-protein phosphatase non-receptor type 9; Protein-tyrosine phosphatase that could participate in the transfer of hydrophobic ligands or in functions of the Golgi apparatus. | 0.410 |