Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Bud23 | Fau | ENSRNOP00000047461 | ENSRNOP00000028481 | BUD23, rRNA methyltransferase and ribosome maturation factor. | Ubiquitin-like protein FUBI. | 0.719 |
| Bud23 | Mettl5 | ENSRNOP00000047461 | ENSRNOP00000011304 | BUD23, rRNA methyltransferase and ribosome maturation factor. | Similar to 2810410A08Rik protein (Predicted). | 0.568 |
| Bud23 | N6amt1 | ENSRNOP00000047461 | ENSRNOP00000002182 | BUD23, rRNA methyltransferase and ribosome maturation factor. | N-6 adenine-specific DNA methyltransferase 1. | 0.534 |
| Bud23 | Trmt11 | ENSRNOP00000047461 | ENSRNOP00000069979 | BUD23, rRNA methyltransferase and ribosome maturation factor. | tRNA (guanine(10)-N2)-methyltransferase homolog; Catalytic subunit of an S-adenosyl-L-methionine-dependent tRNA methyltransferase complex that mediates the methylation of the guanosine nucleotide at position 10 (m2G10) in tRNAs. | 0.666 |
| Bud23 | Trmt112 | ENSRNOP00000047461 | ENSRNOP00000028695 | BUD23, rRNA methyltransferase and ribosome maturation factor. | Similar to RIKEN cDNA 0610038D11 (Predicted), isoform CRA_b. | 0.987 |
| Bud23 | Trmt12 | ENSRNOP00000047461 | ENSRNOP00000011874 | BUD23, rRNA methyltransferase and ribosome maturation factor. | tRNA wybutosine-synthesizing protein 2 homolog; S-adenosyl-L-methionine-dependent transferase that acts as a component of the wybutosine biosynthesis pathway. Wybutosine is a hyper modified guanosine with a tricyclic base found at the 3'-position adjacent to the anticodon of eukaryotic phenylalanine tRNA. Catalyzes the transfer of the alpha-amino-alpha-carboxypropyl (acp) group from S- adenosyl-L-methionine to the C-7 position of 4-demethylwyosine (imG-14) to produce wybutosine-86 (By similarity). | 0.726 |
| F1M3Y3_RAT | Fau | ENSRNOP00000042423 | ENSRNOP00000028481 | Methyltransf_25 domain-containing protein. | Ubiquitin-like protein FUBI. | 0.719 |
| F1M3Y3_RAT | Trmt11 | ENSRNOP00000042423 | ENSRNOP00000069979 | Methyltransf_25 domain-containing protein. | tRNA (guanine(10)-N2)-methyltransferase homolog; Catalytic subunit of an S-adenosyl-L-methionine-dependent tRNA methyltransferase complex that mediates the methylation of the guanosine nucleotide at position 10 (m2G10) in tRNAs. | 0.482 |
| F1M3Y3_RAT | Trmt112 | ENSRNOP00000042423 | ENSRNOP00000028695 | Methyltransf_25 domain-containing protein. | Similar to RIKEN cDNA 0610038D11 (Predicted), isoform CRA_b. | 0.843 |
| Fau | Bud23 | ENSRNOP00000028481 | ENSRNOP00000047461 | Ubiquitin-like protein FUBI. | BUD23, rRNA methyltransferase and ribosome maturation factor. | 0.719 |
| Fau | F1M3Y3_RAT | ENSRNOP00000028481 | ENSRNOP00000042423 | Ubiquitin-like protein FUBI. | Methyltransf_25 domain-containing protein. | 0.719 |
| Fau | Mettl27 | ENSRNOP00000028481 | ENSRNOP00000065369 | Ubiquitin-like protein FUBI. | Methyltransferase-like 27. | 0.719 |
| Fau | Trmt112 | ENSRNOP00000028481 | ENSRNOP00000028695 | Ubiquitin-like protein FUBI. | Similar to RIKEN cDNA 0610038D11 (Predicted), isoform CRA_b. | 0.812 |
| Hemk1 | N6amt1 | ENSRNOP00000020781 | ENSRNOP00000002182 | HemK methyltransferase family member 1 (Predicted). | N-6 adenine-specific DNA methyltransferase 1. | 0.534 |
| Hemk1 | Trmt11 | ENSRNOP00000020781 | ENSRNOP00000069979 | HemK methyltransferase family member 1 (Predicted). | tRNA (guanine(10)-N2)-methyltransferase homolog; Catalytic subunit of an S-adenosyl-L-methionine-dependent tRNA methyltransferase complex that mediates the methylation of the guanosine nucleotide at position 10 (m2G10) in tRNAs. | 0.402 |
| Hemk1 | Trmt112 | ENSRNOP00000020781 | ENSRNOP00000028695 | HemK methyltransferase family member 1 (Predicted). | Similar to RIKEN cDNA 0610038D11 (Predicted), isoform CRA_b. | 0.860 |
| Hemk1 | Trmt12 | ENSRNOP00000020781 | ENSRNOP00000011874 | HemK methyltransferase family member 1 (Predicted). | tRNA wybutosine-synthesizing protein 2 homolog; S-adenosyl-L-methionine-dependent transferase that acts as a component of the wybutosine biosynthesis pathway. Wybutosine is a hyper modified guanosine with a tricyclic base found at the 3'-position adjacent to the anticodon of eukaryotic phenylalanine tRNA. Catalyzes the transfer of the alpha-amino-alpha-carboxypropyl (acp) group from S- adenosyl-L-methionine to the C-7 position of 4-demethylwyosine (imG-14) to produce wybutosine-86 (By similarity). | 0.445 |
| Mettl27 | Fau | ENSRNOP00000065369 | ENSRNOP00000028481 | Methyltransferase-like 27. | Ubiquitin-like protein FUBI. | 0.719 |
| Mettl27 | Mettl5 | ENSRNOP00000065369 | ENSRNOP00000011304 | Methyltransferase-like 27. | Similar to 2810410A08Rik protein (Predicted). | 0.644 |
| Mettl27 | Trmt11 | ENSRNOP00000065369 | ENSRNOP00000069979 | Methyltransferase-like 27. | tRNA (guanine(10)-N2)-methyltransferase homolog; Catalytic subunit of an S-adenosyl-L-methionine-dependent tRNA methyltransferase complex that mediates the methylation of the guanosine nucleotide at position 10 (m2G10) in tRNAs. | 0.482 |
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