STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrrc14bSimilar to LOC432779 protein (Predicted). (510 aa)    
Predicted Functional Partners:
Tmem236
Transmembrane protein 236.
      
 0.678
Pik3ip1
Phosphoinositide-3-kinase-interacting protein 1; Negative regulator of hepatic phosphatidylinositol 3-kinase (PI3K) activity.
   
  
 0.594
Ttc9
Tetratricopeptide repeat domain 9.
   
  
 0.593
Ccdc127
Coiled-coil domain-containing protein 127.
   
  
 0.580
Ddit4l
DNA damage-inducible transcript 4-like protein; Inhibits cell growth by regulating the TOR signaling pathway upstream of the TSC1-TSC2 complex and downstream of AKT1. Belongs to the DDIT4 family.
   
  
 0.575
Otogl
Otogelin-like.
      
 0.575
Asb12
Ankyrin repeat and SOCS box-containing 12.
   
  
 0.563
Tmtc1
Transmembrane O-mannosyltransferase targeting cadherins 1.
      
 0.558
Lmod3
Leiomodin 3.
   
  
 0.554
Iqca1l
IQ and AAA domain-containing protein 1-like.
      
 0.547
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.