Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Sit1Signaling threshold-regulating transmembrane adapter 1; Negatively regulates T-cell antigen receptor (TCR)-mediated signaling. Involved in positive selection of T-cells. (178 aa)    
Predicted Functional Partners:
Cd7
CD7 antigen (Predicted).
   
  
 0.729
Ly6d
Lymphocyte antigen 6 complex, locus D (Predicted).
   
  
 0.570
Acat2l1
Acetyl-CoA acetyltransferase, cytosolic; Involved in the biosynthetic pathway of cholesterol.
      
 0.496
RT1-T24-4
Histocompatibility 2, T region locus 24; Belongs to the MHC class I family.
   
  
 0.466
Kifap3
Kinesin-associated protein 3.
      
 0.448
Trat1
T cell receptor-associated transmembrane adaptor 1.
   
  
 0.442
Slamf9
SLAM family member 9 (Predicted).
  
    0.441
Tmco2
Transmembrane and coiled-coil domains 2.
  
     0.409
Arl10
ADP-ribosylation factor-like 10, isoform CRA_a.
      
 0.409
Cyp3a18
Cytochrome P450 3A18; Catalyzes 16-beta- and 6-alpha-hydroxylations of testosterone.
      
 0.408
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
Server load: low (14%) [HD]