Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cd99l2-2CD99 molecule-like 2. (246 aa)    
Predicted Functional Partners:
Cd99
CD99 molecule (Xg blood group).
     
  0.743
Zfp853
Uncharacterized protein.
      
 0.630
Wdr54
Similar to D3Mm3e (Predicted), isoform CRA_a.
   
  
 0.611
Wdr54-2
WD repeat-containing protein 54.
      
 0.610
Syde1
Synapse defective Rho GTPase homolog 1.
      
 0.512
Aar2
Similar to RIKEN cDNA 0610011L14 gene.
      
 0.499
LOC108348161
phytanoyl-CoA 2-hydroxylase interacting protein.
      
 0.447
Yipf6
Protein YIPF6; May be required for stable YIPF1 and YIPF2 protein expression.
      
 0.444
Pyroxd2
Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2; Probable oxidoreductase.
      
 0.440
Phyhip
Phytanoyl-CoA hydroxylase-interacting protein; Its interaction with PHYH suggests a role in the development of the central system; Belongs to the PHYHIP family.
      
 0.438
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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