Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A0G2K5Q5_RAT | Tab3 | ENSRNOP00000073516 | ENSRNOP00000004854 | C2H2-type domain-containing protein. | TGF-beta-activated kinase 1 (MAP3K7)-binding protein 3. | 0.427 |
A0A0G2K5Q5_RAT | Usf3 | ENSRNOP00000073516 | ENSRNOP00000076256 | C2H2-type domain-containing protein. | Upstream transcription factor family member 3. | 0.417 |
Tab3 | A0A0G2K5Q5_RAT | ENSRNOP00000004854 | ENSRNOP00000073516 | TGF-beta-activated kinase 1 (MAP3K7)-binding protein 3. | C2H2-type domain-containing protein. | 0.427 |
Tab3 | Usf3 | ENSRNOP00000004854 | ENSRNOP00000076256 | TGF-beta-activated kinase 1 (MAP3K7)-binding protein 3. | Upstream transcription factor family member 3. | 0.466 |
Tcf20 | Usf3 | ENSRNOP00000012699 | ENSRNOP00000076256 | Transcription factor 20 (Mapped). | Upstream transcription factor family member 3. | 0.427 |
Usf3 | A0A0G2K5Q5_RAT | ENSRNOP00000076256 | ENSRNOP00000073516 | Upstream transcription factor family member 3. | C2H2-type domain-containing protein. | 0.417 |
Usf3 | Tab3 | ENSRNOP00000076256 | ENSRNOP00000004854 | Upstream transcription factor family member 3. | TGF-beta-activated kinase 1 (MAP3K7)-binding protein 3. | 0.466 |
Usf3 | Tcf20 | ENSRNOP00000076256 | ENSRNOP00000012699 | Upstream transcription factor family member 3. | Transcription factor 20 (Mapped). | 0.427 |