STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rad9bCell cycle checkpoint control protein RAD9B. (398 aa)    
Predicted Functional Partners:
Rad1
RAD1 homolog (S. pombe) (Predicted).
    
 0.986
Atr
ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.
    
 0.955
Hus1
Checkpoint protein; Belongs to the HUS1 family.
   
 0.943
Topbp1
DNA topoisomerase II-binding protein 1.
    
 0.941
Rad17
RAD17 checkpoint clamp loader component.
   
 0.932
Rfc2
Replication factor C subunit 2; The elongation of primed DNA templates by DNA polymerase delta and epsilon requires the action of the accessory proteins proliferating cell nuclear antigen (PCNA) and activator 1. This subunit binds ATP (By similarity).
   
 0.920
Rfc4
Replication factor C (Activator 1) 4 (Predicted), isoform CRA_a.
   
 0.918
Rad9a
Cell cycle checkpoint control protein; Belongs to the rad9 family.
  
  
0.908
Rfc3
Replication factor C (Activator 1) 3.
   
 0.896
Rfc5
Replication factor C (Activator 1) 5 (Predicted).
   
 0.890
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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