Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Fam8a1 | Kif13a | ENSRNOP00000057242 | ENSRNOP00000060386 | Family with sequence similarity 8, member A1. | Kinesin family member 13A (Predicted); Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.527 |
Fam8a1 | LOC102554838 | ENSRNOP00000057242 | ENSRNOP00000046185 | Family with sequence similarity 8, member A1. | Stathmin domain-containing protein 1-like. | 0.548 |
Fam8a1 | Mylip | ENSRNOP00000057242 | ENSRNOP00000024021 | Family with sequence similarity 8, member A1. | E3 ubiquitin-protein ligase MYLIP; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of myosin regulatory light chain (MRLC), LDLR, VLDLR and LRP8. Activity depends on E2 enzymes of the UBE2D family. Proteasomal degradation of MRLC leads to inhibit neurite outgrowth in presence of NGF by counteracting the stabilization of MRLC by saposin-like protein (CNPY2/MSAP) and reducing CNPY2-stimulated neurite outgrowth. Acts as a sterol-dependent inhibitor of cellular cholesterol uptake by mediating ubiquitination and subsequent degradation of LDLR. | 0.415 |
Kif13a | Fam8a1 | ENSRNOP00000060386 | ENSRNOP00000057242 | Kinesin family member 13A (Predicted); Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | Family with sequence similarity 8, member A1. | 0.527 |
Kif13a | LOC102554838 | ENSRNOP00000060386 | ENSRNOP00000046185 | Kinesin family member 13A (Predicted); Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | Stathmin domain-containing protein 1-like. | 0.548 |
LOC102554838 | Fam8a1 | ENSRNOP00000046185 | ENSRNOP00000057242 | Stathmin domain-containing protein 1-like. | Family with sequence similarity 8, member A1. | 0.548 |
LOC102554838 | Kif13a | ENSRNOP00000046185 | ENSRNOP00000060386 | Stathmin domain-containing protein 1-like. | Kinesin family member 13A (Predicted); Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.548 |
LOC102554838 | Mylip | ENSRNOP00000046185 | ENSRNOP00000024021 | Stathmin domain-containing protein 1-like. | E3 ubiquitin-protein ligase MYLIP; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of myosin regulatory light chain (MRLC), LDLR, VLDLR and LRP8. Activity depends on E2 enzymes of the UBE2D family. Proteasomal degradation of MRLC leads to inhibit neurite outgrowth in presence of NGF by counteracting the stabilization of MRLC by saposin-like protein (CNPY2/MSAP) and reducing CNPY2-stimulated neurite outgrowth. Acts as a sterol-dependent inhibitor of cellular cholesterol uptake by mediating ubiquitination and subsequent degradation of LDLR. | 0.465 |
Mylip | Fam8a1 | ENSRNOP00000024021 | ENSRNOP00000057242 | E3 ubiquitin-protein ligase MYLIP; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of myosin regulatory light chain (MRLC), LDLR, VLDLR and LRP8. Activity depends on E2 enzymes of the UBE2D family. Proteasomal degradation of MRLC leads to inhibit neurite outgrowth in presence of NGF by counteracting the stabilization of MRLC by saposin-like protein (CNPY2/MSAP) and reducing CNPY2-stimulated neurite outgrowth. Acts as a sterol-dependent inhibitor of cellular cholesterol uptake by mediating ubiquitination and subsequent degradation of LDLR. | Family with sequence similarity 8, member A1. | 0.415 |
Mylip | LOC102554838 | ENSRNOP00000024021 | ENSRNOP00000046185 | E3 ubiquitin-protein ligase MYLIP; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of myosin regulatory light chain (MRLC), LDLR, VLDLR and LRP8. Activity depends on E2 enzymes of the UBE2D family. Proteasomal degradation of MRLC leads to inhibit neurite outgrowth in presence of NGF by counteracting the stabilization of MRLC by saposin-like protein (CNPY2/MSAP) and reducing CNPY2-stimulated neurite outgrowth. Acts as a sterol-dependent inhibitor of cellular cholesterol uptake by mediating ubiquitination and subsequent degradation of LDLR. | Stathmin domain-containing protein 1-like. | 0.465 |