STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BcamBasal cell adhesion molecule; Laminin alpha-5 receptor. May mediate intracellular signaling (By similarity). (624 aa)    
Predicted Functional Partners:
Lama4
Laminin subunit alpha 4.
   
 
 0.676
Akirin2
Akirin-2; Required for the innate immune response. Downstream effector of the Toll-like receptor (TLR), TNF and IL-1 beta signaling pathways leading to the production of IL-6 (By similarity). Forms a complex with YWHAB that acts to repress transcription of DUSP1; Belongs to the akirin family.
    
 
 0.571
Icam4
Intercellular adhesion molecule 4, Landsteiner-Wiener blood group.
      
 0.479
Lama5
Laminin, alpha 5, isoform CRA_a.
   
 
 0.457
Flt3lg
Fms-related tyrosine kinase 3 ligand.
  
     0.434
Ltbp4
Latent-transforming growth factor beta-binding protein 4.
  
   0.432
Nectin2
Nectin cell adhesion molecule 2.
   
  
 0.409
LOC689065
Hypothetical protein LOC689065.
  
     0.402
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.