STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adam6aA disintegrin and metallopeptidase domain 6A. (751 aa)    
Predicted Functional Partners:
Clgn
Calmegin.
   
 
 0.558
Tex55
RCG52781, isoform CRA_b.
   
  
 0.497
Mslnl
Mesothelin-like.
      
 0.485
Adam5
Disintegrin and metalloproteinase domain-containing protein 5; This is a non catalytic metalloprotease-like protein. May play a role in sperm-egg fusion (By similarity).
  
 
0.476
Adam3a
ADAM metallopeptidase domain 3A.
  
 
0.473
Rnase10
Inactive ribonuclease-like protein 10; Secreted proximal epididymal protein required for post- testicular sperm maturation and male fertility. May be involved in sperm adhesion to the egg zona pellucida. Does not have ribonuclease activity (By similarity).
   
  
 0.470
Prss44
RGD1560940 protein; Belongs to the peptidase S1 family.
   
  
 0.469
Adamtsl5
ADAMTS-like 5 (Predicted), isoform CRA_a.
   
  
 0.469
Olfml2a
Olfactomedin-like 2A.
      
 0.440
Rpf2
Ribosome production factor 2 homolog.
      
 0.439
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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