Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Elane | RGD1565462 | ENSRNOP00000014981 | ENSRNOP00000054092 | Elastase 2, neutrophil (Predicted); Belongs to the peptidase S1 family. | Serine protease inhibitor A3F-like. | 0.416 |
F2 | RGD1565462 | ENSRNOP00000022233 | ENSRNOP00000054092 | Activation peptide fragment 1; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family. | Serine protease inhibitor A3F-like. | 0.510 |
Ift122 | RGD1565462 | ENSRNOP00000071095 | ENSRNOP00000054092 | Intraflagellar transport 122. | Serine protease inhibitor A3F-like. | 0.426 |
Ift122 | Spi1 | ENSRNOP00000071095 | ENSRNOP00000016306 | Intraflagellar transport 122. | Transcription factor PU.1; Binds to the PU-box, a purine-rich DNA sequence (5'-GAGGAA- 3') that can act as a lymphoid-specific enhancer. This protein is a transcriptional activator that may be specifically involved in the differentiation or activation of macrophages or B-cells. Also binds RNA and may modulate pre-mRNA splicing (By similarity). | 0.556 |
RGD1565462 | Elane | ENSRNOP00000054092 | ENSRNOP00000014981 | Serine protease inhibitor A3F-like. | Elastase 2, neutrophil (Predicted); Belongs to the peptidase S1 family. | 0.416 |
RGD1565462 | F2 | ENSRNOP00000054092 | ENSRNOP00000022233 | Serine protease inhibitor A3F-like. | Activation peptide fragment 1; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family. | 0.510 |
RGD1565462 | Ift122 | ENSRNOP00000054092 | ENSRNOP00000071095 | Serine protease inhibitor A3F-like. | Intraflagellar transport 122. | 0.426 |
RGD1565462 | Spi1 | ENSRNOP00000054092 | ENSRNOP00000016306 | Serine protease inhibitor A3F-like. | Transcription factor PU.1; Binds to the PU-box, a purine-rich DNA sequence (5'-GAGGAA- 3') that can act as a lymphoid-specific enhancer. This protein is a transcriptional activator that may be specifically involved in the differentiation or activation of macrophages or B-cells. Also binds RNA and may modulate pre-mRNA splicing (By similarity). | 0.550 |
Spi1 | Ift122 | ENSRNOP00000016306 | ENSRNOP00000071095 | Transcription factor PU.1; Binds to the PU-box, a purine-rich DNA sequence (5'-GAGGAA- 3') that can act as a lymphoid-specific enhancer. This protein is a transcriptional activator that may be specifically involved in the differentiation or activation of macrophages or B-cells. Also binds RNA and may modulate pre-mRNA splicing (By similarity). | Intraflagellar transport 122. | 0.556 |
Spi1 | RGD1565462 | ENSRNOP00000016306 | ENSRNOP00000054092 | Transcription factor PU.1; Binds to the PU-box, a purine-rich DNA sequence (5'-GAGGAA- 3') that can act as a lymphoid-specific enhancer. This protein is a transcriptional activator that may be specifically involved in the differentiation or activation of macrophages or B-cells. Also binds RNA and may modulate pre-mRNA splicing (By similarity). | Serine protease inhibitor A3F-like. | 0.550 |