Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ccm2l | LOC100911068 | ENSRNOP00000012187 | ENSRNOP00000057050 | CCM2-like scaffold protein. | Roundabout homolog 4-like. | 0.669 |
Ccm2l | Mmrn2 | ENSRNOP00000012187 | ENSRNOP00000074627 | CCM2-like scaffold protein. | Multimerin 2. | 0.598 |
Ccm2l | Sox18 | ENSRNOP00000012187 | ENSRNOP00000021790 | CCM2-like scaffold protein. | SRY (Sex determining region Y)-box 18. | 0.421 |
Cldn5 | Egfl7 | ENSRNOP00000064048 | ENSRNOP00000026318 | Claudin-5; Plays a major role in tight junction-specific obliteration of the intercellular space. | Epidermal growth factor-like protein 7; Regulates vascular tubulogenesis in vivo. Inhibits platelet- derived growth factor (PDGF)-BB-induced smooth muscle cell migration and promotes endothelial cell adhesion to the extracellular matrix and angiogenesis (By similarity). | 0.712 |
Cldn5 | LOC100911068 | ENSRNOP00000064048 | ENSRNOP00000057050 | Claudin-5; Plays a major role in tight junction-specific obliteration of the intercellular space. | Roundabout homolog 4-like. | 0.768 |
Cldn5 | Mmrn2 | ENSRNOP00000064048 | ENSRNOP00000074627 | Claudin-5; Plays a major role in tight junction-specific obliteration of the intercellular space. | Multimerin 2. | 0.565 |
Cldn5 | Sox18 | ENSRNOP00000064048 | ENSRNOP00000021790 | Claudin-5; Plays a major role in tight junction-specific obliteration of the intercellular space. | SRY (Sex determining region Y)-box 18. | 0.977 |
Egfl7 | Cldn5 | ENSRNOP00000026318 | ENSRNOP00000064048 | Epidermal growth factor-like protein 7; Regulates vascular tubulogenesis in vivo. Inhibits platelet- derived growth factor (PDGF)-BB-induced smooth muscle cell migration and promotes endothelial cell adhesion to the extracellular matrix and angiogenesis (By similarity). | Claudin-5; Plays a major role in tight junction-specific obliteration of the intercellular space. | 0.712 |
Egfl7 | LOC100911068 | ENSRNOP00000026318 | ENSRNOP00000057050 | Epidermal growth factor-like protein 7; Regulates vascular tubulogenesis in vivo. Inhibits platelet- derived growth factor (PDGF)-BB-induced smooth muscle cell migration and promotes endothelial cell adhesion to the extracellular matrix and angiogenesis (By similarity). | Roundabout homolog 4-like. | 0.678 |
Egfl7 | Mmrn2 | ENSRNOP00000026318 | ENSRNOP00000074627 | Epidermal growth factor-like protein 7; Regulates vascular tubulogenesis in vivo. Inhibits platelet- derived growth factor (PDGF)-BB-induced smooth muscle cell migration and promotes endothelial cell adhesion to the extracellular matrix and angiogenesis (By similarity). | Multimerin 2. | 0.474 |
Egfl7 | Sox18 | ENSRNOP00000026318 | ENSRNOP00000021790 | Epidermal growth factor-like protein 7; Regulates vascular tubulogenesis in vivo. Inhibits platelet- derived growth factor (PDGF)-BB-induced smooth muscle cell migration and promotes endothelial cell adhesion to the extracellular matrix and angiogenesis (By similarity). | SRY (Sex determining region Y)-box 18. | 0.559 |
LOC100911068 | Ccm2l | ENSRNOP00000057050 | ENSRNOP00000012187 | Roundabout homolog 4-like. | CCM2-like scaffold protein. | 0.669 |
LOC100911068 | Cldn5 | ENSRNOP00000057050 | ENSRNOP00000064048 | Roundabout homolog 4-like. | Claudin-5; Plays a major role in tight junction-specific obliteration of the intercellular space. | 0.768 |
LOC100911068 | Egfl7 | ENSRNOP00000057050 | ENSRNOP00000026318 | Roundabout homolog 4-like. | Epidermal growth factor-like protein 7; Regulates vascular tubulogenesis in vivo. Inhibits platelet- derived growth factor (PDGF)-BB-induced smooth muscle cell migration and promotes endothelial cell adhesion to the extracellular matrix and angiogenesis (By similarity). | 0.678 |
LOC100911068 | Mmrn2 | ENSRNOP00000057050 | ENSRNOP00000074627 | Roundabout homolog 4-like. | Multimerin 2. | 0.747 |
LOC100911068 | Pxn | ENSRNOP00000057050 | ENSRNOP00000043928 | Roundabout homolog 4-like. | Paxillin; Cytoskeletal protein involved in actin-membrane attachment at sites of cell adhesion to the extracellular matrix (focal adhesion). Belongs to the paxillin family. | 0.873 |
LOC100911068 | Slit1 | ENSRNOP00000057050 | ENSRNOP00000035315 | Roundabout homolog 4-like. | Slit homolog 1 protein; Thought to act as molecular guidance cue in cellular migration, and function appears to be mediated by interaction with roundabout homolog receptors. During neural development involved in axonal navigation at the ventral midline of the neural tube and projection of axons to different regions. SLIT1 and SLIT2 together seem to be essential for midline guidance in the forebrain by acting as repulsive signal preventing inappropriate midline crossing by axons projecting from the olfactory bulb (By similarity). | 0.945 |
LOC100911068 | Slit2 | ENSRNOP00000057050 | ENSRNOP00000005477 | Roundabout homolog 4-like. | Slit homolog 2 protein; Thought to act as molecular guidance cue in cellular migration, and function appears to be mediated by interaction with roundabout homolog receptors. During neural development involved in axonal navigation at the ventral midline of the neural tube and projection of axons to different regions. SLIT1 and SLIT2 seem to be essential for midline guidance in the forebrain by acting as repulsive signal preventing inappropriate midline crossing by axons projecting from the olfactory bulb. In spinal chord development may play a role in guiding commissural axons once they [...] | 0.956 |
LOC100911068 | Slit3 | ENSRNOP00000057050 | ENSRNOP00000009714 | Roundabout homolog 4-like. | Slit homolog 3 protein; May act as molecular guidance cue in cellular migration, and function may be mediated by interaction with roundabout homolog receptors. | 0.931 |
LOC100911068 | Sox18 | ENSRNOP00000057050 | ENSRNOP00000021790 | Roundabout homolog 4-like. | SRY (Sex determining region Y)-box 18. | 0.766 |
page 1 of 3