Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Gdi2 | RGD1563962 | ENSRNOP00000024952 | ENSRNOP00000066145 | Rab GDP dissociation inhibitor beta; Regulates the GDP/GTP exchange reaction of most Rab proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP to them. | RAB interacting factor. | 0.421 |
| Gdi2 | Rabggta | ENSRNOP00000024952 | ENSRNOP00000049261 | Rab GDP dissociation inhibitor beta; Regulates the GDP/GTP exchange reaction of most Rab proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP to them. | Geranylgeranyl transferase type-2 subunit alpha; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of Rab proteins with the C-terminal sequence -XXCC, -XCXC and -CCXX, such as RAB1A, RAB3A, RAB5A and RAB7A. | 0.542 |
| Gdi2 | Rabl6 | ENSRNOP00000024952 | ENSRNOP00000060618 | Rab GDP dissociation inhibitor beta; Regulates the GDP/GTP exchange reaction of most Rab proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP to them. | RAB, member RAS oncogene family-like 6. | 0.598 |
| Gdi2 | Trappc1 | ENSRNOP00000024952 | ENSRNOP00000075251 | Rab GDP dissociation inhibitor beta; Regulates the GDP/GTP exchange reaction of most Rab proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP to them. | Trafficking protein particle complex subunit 1; May play a role in vesicular transport from endoplasmic reticulum to Golgi. | 0.474 |
| Gdi2 | Trappc4 | ENSRNOP00000024952 | ENSRNOP00000016145 | Rab GDP dissociation inhibitor beta; Regulates the GDP/GTP exchange reaction of most Rab proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP to them. | Trafficking protein particle complex subunit 4; May play a role in vesicular transport from endoplasmic reticulum to Golgi. | 0.462 |
| Gdi2 | Trappc5 | ENSRNOP00000024952 | ENSRNOP00000001327 | Rab GDP dissociation inhibitor beta; Regulates the GDP/GTP exchange reaction of most Rab proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP to them. | Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi. | 0.433 |
| Gdi2 | Trappc8 | ENSRNOP00000024952 | ENSRNOP00000021263 | Rab GDP dissociation inhibitor beta; Regulates the GDP/GTP exchange reaction of most Rab proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP to them. | Trafficking protein particle complex 8. | 0.426 |
| Gdi2 | Vps33b | ENSRNOP00000024952 | ENSRNOP00000017862 | Rab GDP dissociation inhibitor beta; Regulates the GDP/GTP exchange reaction of most Rab proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP to them. | Vacuolar protein sorting-associated protein 33B; May play a role in vesicle-mediated protein trafficking to lysosomal compartments and in membrane docking/fusion reactions of late endosomes/lysosomes. Mediates phagolysosomal fusion in macrophages. Proposed to be involved in endosomal maturation implicating VIPAS39. In epithelial cells, the VPS33B:VIPAS39 complex may play a role in the apical recycling pathway and in the maintenance of the apical- basolateral polarity. Seems to be involved in the sorting of specific cargos from the trans-Golgi network to alpha-granule-destined multivesi [...] | 0.566 |
| RGD1563962 | Gdi2 | ENSRNOP00000066145 | ENSRNOP00000024952 | RAB interacting factor. | Rab GDP dissociation inhibitor beta; Regulates the GDP/GTP exchange reaction of most Rab proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP to them. | 0.421 |
| RGD1563962 | Rabggta | ENSRNOP00000066145 | ENSRNOP00000049261 | RAB interacting factor. | Geranylgeranyl transferase type-2 subunit alpha; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of Rab proteins with the C-terminal sequence -XXCC, -XCXC and -CCXX, such as RAB1A, RAB3A, RAB5A and RAB7A. | 0.405 |
| RGD1563962 | Rabl3 | ENSRNOP00000066145 | ENSRNOP00000033847 | RAB interacting factor. | RAB, member of RAS oncogene family-like 3 (Predicted), isoform CRA_a. | 0.583 |
| RGD1563962 | Rabl6 | ENSRNOP00000066145 | ENSRNOP00000060618 | RAB interacting factor. | RAB, member RAS oncogene family-like 6. | 0.759 |
| Rabggta | Gdi2 | ENSRNOP00000049261 | ENSRNOP00000024952 | Geranylgeranyl transferase type-2 subunit alpha; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of Rab proteins with the C-terminal sequence -XXCC, -XCXC and -CCXX, such as RAB1A, RAB3A, RAB5A and RAB7A. | Rab GDP dissociation inhibitor beta; Regulates the GDP/GTP exchange reaction of most Rab proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP to them. | 0.542 |
| Rabggta | RGD1563962 | ENSRNOP00000049261 | ENSRNOP00000066145 | Geranylgeranyl transferase type-2 subunit alpha; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of Rab proteins with the C-terminal sequence -XXCC, -XCXC and -CCXX, such as RAB1A, RAB3A, RAB5A and RAB7A. | RAB interacting factor. | 0.405 |
| Rabggta | Rabl3 | ENSRNOP00000049261 | ENSRNOP00000033847 | Geranylgeranyl transferase type-2 subunit alpha; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of Rab proteins with the C-terminal sequence -XXCC, -XCXC and -CCXX, such as RAB1A, RAB3A, RAB5A and RAB7A. | RAB, member of RAS oncogene family-like 3 (Predicted), isoform CRA_a. | 0.664 |
| Rabggta | Rabl6 | ENSRNOP00000049261 | ENSRNOP00000060618 | Geranylgeranyl transferase type-2 subunit alpha; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of Rab proteins with the C-terminal sequence -XXCC, -XCXC and -CCXX, such as RAB1A, RAB3A, RAB5A and RAB7A. | RAB, member RAS oncogene family-like 6. | 0.608 |
| Rabl3 | RGD1563962 | ENSRNOP00000033847 | ENSRNOP00000066145 | RAB, member of RAS oncogene family-like 3 (Predicted), isoform CRA_a. | RAB interacting factor. | 0.583 |
| Rabl3 | Rabggta | ENSRNOP00000033847 | ENSRNOP00000049261 | RAB, member of RAS oncogene family-like 3 (Predicted), isoform CRA_a. | Geranylgeranyl transferase type-2 subunit alpha; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of Rab proteins with the C-terminal sequence -XXCC, -XCXC and -CCXX, such as RAB1A, RAB3A, RAB5A and RAB7A. | 0.664 |
| Rabl3 | Rabl6 | ENSRNOP00000033847 | ENSRNOP00000060618 | RAB, member of RAS oncogene family-like 3 (Predicted), isoform CRA_a. | RAB, member RAS oncogene family-like 6. | 0.664 |
| Rabl6 | Gdi2 | ENSRNOP00000060618 | ENSRNOP00000024952 | RAB, member RAS oncogene family-like 6. | Rab GDP dissociation inhibitor beta; Regulates the GDP/GTP exchange reaction of most Rab proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP to them. | 0.598 |
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