STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F1M3N3_RATUncharacterized protein. (247 aa)    
Predicted Functional Partners:
Cfap74
Cilia and flagella-associated protein 74.
 
    0.950
Lrguk
Leucine-rich repeats and guanylate kinase domain-containing.
    
 
 0.736
Cfap221
Cilia and flagella-associated protein 221.
   
 
 0.577
Ttc29
Tetratricopeptide repeat protein 29.
   
  
 0.571
Cfap65
Cilia and flagella-associated protein 65.
    
 
 0.555
Fsip2
Fibrous sheath-interacting protein 2.
    
 
 0.546
Ccdc189
Coiled-coil domain-containing 189.
    
 
 0.529
Spag17
Sperm-associated antigen 17.
    
 
 0.516
Cfap43
Cilia and flagella-associated protein 43.
      
 0.499
Mycbp
Myc-binding protein.
    
 
 0.496
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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