STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krtcap3Keratinocyte-associated protein 3. (240 aa)    
Predicted Functional Partners:
Ccdc121
Coiled-coil domain-containing 121.
      
 0.739
Zfp512
Zinc finger protein 512.
      
 0.699
Supt7l
Similar to STAGA complex 65 gamma subunit (Predicted).
      
 0.696
Slc4a1ap
Solute carrier family 4 member 1 adaptor protein.
      
 0.675
Nrbp1
Nuclear receptor-binding protein 1.
 
    
 0.669
A0A096MKG0_RAT
Uncharacterized protein.
      
 0.660
Trmt10a
tRNA methyltransferase 10 homolog A; S-adenosyl-L-methionine-dependent guanine N(1)- methyltransferase that catalyzes the formation of N(1)-methylguanine at position 9 (m1G9) in tRNAs. Probably not able to catalyze formation of N(1)-methyladenine at position 9 (m1A9) in tRNAs.
      
 0.633
Zfp513
Zinc finger protein 513; Transcriptional regulator that plays a role in retinal development and maintenance.
      
 0.626
Gtf3c2
General transcription factor IIIC subunit 2.
      
 0.614
Prlhr
Prolactin-releasing peptide receptor; Receptor for prolactin-releasing peptide (PrRP). Implicated in lactation, regulation of food intake and pain-signal processing; Belongs to the G-protein coupled receptor 1 family.
      
 0.581
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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