Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cdc40 | Cwc22 | ENSRNOP00000071389 | ENSRNOP00000039180 | Cell division cycle 40. | CWC22 spliceosome-associated protein homolog. | 0.967 |
Cdc40 | Cwc25 | ENSRNOP00000071389 | ENSRNOP00000005426 | Cell division cycle 40. | CWC25 spliceosome-associated protein homolog. | 0.994 |
Cdc40 | Dhx38 | ENSRNOP00000071389 | ENSRNOP00000019810 | Cell division cycle 40. | DEAH-box helicase 38. | 0.995 |
Cdc40 | Isy1 | ENSRNOP00000071389 | ENSRNOP00000013571 | Cell division cycle 40. | Pre-mRNA-splicing factor ISY1 homolog; Component of the spliceosome C complex required for the selective processing of microRNAs during embryonic stem cell differentiation (By similarity). Required for the biogenesis of all miRNAs from the pri-miR-17-92 primary transcript except miR-92a (By similarity). Only required for the biogenesis of miR-290 and miR-96 from the pri-miR-290-295 and pri-miR-96-183 primary transcripts, respectively (By similarity). Required during the transition of embryonic stem cells (ESCs) from the naive to primed state (By similarity). By enhancing miRNA biogenes [...] | 0.971 |
Cdc40 | Plrg1 | ENSRNOP00000071389 | ENSRNOP00000009112 | Cell division cycle 40. | Pleiotropic regulator 1; Involved in pre-mRNA splicing as component of the spliceosome. Component of the PRP19-CDC5L complex that forms an integral part of the spliceosome and is required for activating pre- mRNA splicing. | 0.988 |
Cdc40 | Prpf8 | ENSRNOP00000071389 | ENSRNOP00000073574 | Cell division cycle 40. | Pre-mRNA processing factor 8, isoform CRA_a. | 0.992 |
Cdc40 | Snrnp200 | ENSRNOP00000071389 | ENSRNOP00000048598 | Cell division cycle 40. | U5 small nuclear ribonucleoprotein 200 kDa helicase; Plays role in pre-mRNA splicing as core component of precatalytic, catalytic and postcatalytic spliceosomal complexes. Involved in spliceosome assembly, activation and disassembly. Mediates changes in the dynamic network of RNA-RNA interactions in the spliceosome. Catalyzes the ATP-dependent unwinding of U4/U6 RNA duplices, an essential step in the assembly of a catalytically active spliceosome. | 0.977 |
Cdc40 | Srrm2 | ENSRNOP00000071389 | ENSRNOP00000072307 | Cell division cycle 40. | Serine/arginine repetitive matrix 2. | 0.966 |
Cdc40 | Syf2 | ENSRNOP00000071389 | ENSRNOP00000072888 | Cell division cycle 40. | Pre-mRNA-splicing factor SYF2; Involved in pre-mRNA splicing as component of the spliceosome. | 0.994 |
Cdc40 | Yju2 | ENSRNOP00000071389 | ENSRNOP00000067468 | Cell division cycle 40. | Coiled-coil domain containing 94. | 0.968 |
Cwc22 | Cdc40 | ENSRNOP00000039180 | ENSRNOP00000071389 | CWC22 spliceosome-associated protein homolog. | Cell division cycle 40. | 0.967 |
Cwc22 | Cwc25 | ENSRNOP00000039180 | ENSRNOP00000005426 | CWC22 spliceosome-associated protein homolog. | CWC25 spliceosome-associated protein homolog. | 0.967 |
Cwc22 | Dhx38 | ENSRNOP00000039180 | ENSRNOP00000019810 | CWC22 spliceosome-associated protein homolog. | DEAH-box helicase 38. | 0.984 |
Cwc22 | Isy1 | ENSRNOP00000039180 | ENSRNOP00000013571 | CWC22 spliceosome-associated protein homolog. | Pre-mRNA-splicing factor ISY1 homolog; Component of the spliceosome C complex required for the selective processing of microRNAs during embryonic stem cell differentiation (By similarity). Required for the biogenesis of all miRNAs from the pri-miR-17-92 primary transcript except miR-92a (By similarity). Only required for the biogenesis of miR-290 and miR-96 from the pri-miR-290-295 and pri-miR-96-183 primary transcripts, respectively (By similarity). Required during the transition of embryonic stem cells (ESCs) from the naive to primed state (By similarity). By enhancing miRNA biogenes [...] | 0.981 |
Cwc22 | Plrg1 | ENSRNOP00000039180 | ENSRNOP00000009112 | CWC22 spliceosome-associated protein homolog. | Pleiotropic regulator 1; Involved in pre-mRNA splicing as component of the spliceosome. Component of the PRP19-CDC5L complex that forms an integral part of the spliceosome and is required for activating pre- mRNA splicing. | 0.954 |
Cwc22 | Prpf8 | ENSRNOP00000039180 | ENSRNOP00000073574 | CWC22 spliceosome-associated protein homolog. | Pre-mRNA processing factor 8, isoform CRA_a. | 0.958 |
Cwc22 | Snrnp200 | ENSRNOP00000039180 | ENSRNOP00000048598 | CWC22 spliceosome-associated protein homolog. | U5 small nuclear ribonucleoprotein 200 kDa helicase; Plays role in pre-mRNA splicing as core component of precatalytic, catalytic and postcatalytic spliceosomal complexes. Involved in spliceosome assembly, activation and disassembly. Mediates changes in the dynamic network of RNA-RNA interactions in the spliceosome. Catalyzes the ATP-dependent unwinding of U4/U6 RNA duplices, an essential step in the assembly of a catalytically active spliceosome. | 0.953 |
Cwc22 | Srrm2 | ENSRNOP00000039180 | ENSRNOP00000072307 | CWC22 spliceosome-associated protein homolog. | Serine/arginine repetitive matrix 2. | 0.957 |
Cwc22 | Syf2 | ENSRNOP00000039180 | ENSRNOP00000072888 | CWC22 spliceosome-associated protein homolog. | Pre-mRNA-splicing factor SYF2; Involved in pre-mRNA splicing as component of the spliceosome. | 0.960 |
Cwc22 | Yju2 | ENSRNOP00000039180 | ENSRNOP00000067468 | CWC22 spliceosome-associated protein homolog. | Coiled-coil domain containing 94. | 0.955 |
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