STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gramd1cGRAM domain-containing 1C. (488 aa)    
Predicted Functional Partners:
Tmem211
Transmembrane protein 211.
   
  
 0.612
Tmem205
RGD1563250 (Predicted), isoform CRA_a.
      
 0.607
Gramd2b
GRAM domain-containing protein 2B.
    
 
 0.605
Ttc9
Tetratricopeptide repeat domain 9.
   
  
 0.603
Svopl
SVOP-like.
   
  
 0.573
Mslnl
Mesothelin-like.
      
 0.569
Tbc1d8
TBC1 domain family, member 8.
      
 0.559
Wdr17
RCG59107, isoform CRA_a.
      
 0.558
Efr3b
EFR3 homolog B.
      
 0.556
Slc22a20
Gene model 963, (NCBI) (Predicted).
      
 0.553
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.