STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Akap17aA-kinase-anchoring protein 17A. (712 aa)    
Predicted Functional Partners:
Arse
Arylsulfatase E.
   
  
 0.809
Mrpl30
39S ribosomal protein L30, mitochondrial; Belongs to the universal ribosomal protein uL30 family.
      
 0.743
Txlng
Taxilin gamma.
      
 0.671
Asmt
Acetylserotonin O-methyltransferase; Catalyzes the transfer of a methyl group onto N- acetylserotonin, producing melatonin (N-acetyl-5-methoxytryptamine).
      
 0.643
Akap8l
A kinase (PRKA) anchor protein 8-like, isoform CRA_a; Belongs to the AKAP95 family.
   
  
 0.639
Pogk
Pogo transposable element-derived with KRAB domain.
      
 0.632
Evi5l
Ecotropic viral integration site 5-like.
      
 0.624
LOC681410
Hypothetical protein LOC681410.
   
  
 0.598
Asmtl
Acetylserotonin O-methyltransferase-like.
   
  
 0.592
Lsm2
U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
      
 0.589
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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